Aleksey V. Zimin

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• A complete human pancreatic cancer genome

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-06 · 1 citations

• A reference genome sequence for the exceptionally long-lived Great Basin bristlecone pine, <i>Pinus longaeva</i>

  G3 Genes Genomes Genetics · 2026-03-17

• EviAnn 2.0.2 Capsule for the Manuscript "Efficient evidence-based genome annotation with EviAnn" created on Jun 2, 2025 13:25

  Code Ocean · 2026-01-01

• EviAnn 2.0.5 Capsule for the Manuscript "Efficient evidence-based genome annotation with EviAnn" created on Jun 2, 2025 13:25

  Code Ocean · 2026-01-01

• EviAnn 2.0.5 Capsule for the Manuscript "Efficient evidence-based genome annotation with EviAnn" created on Jun 2, 2025 13:25

  Code Ocean · 2026-01-01

• Assembly and quantification of transcripts from noisy long reads with NIFFLR

  F1000Research · 2025-12-03

• The Evolution and Origin of Allotetraploid <scp> <i>Aegilops geniculata</i> </scp> Revealed by the Homoeolog‐Resolved Genome Assembly

  Plant Biotechnology Journal · 2025-11-10 · 1 citations

• Finishing a complete giraffe genome from telomere to telomere with Verkko-FilletPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-10-02 · 1 citations

• Phenotype to genotype: A new and rapid approach using whole-genome sequencing

  PLoS Genetics · 2025-07-14

• Assembly and quantification of transcripts from noisy long reads with NIFFLRPreprint

  F1000Research · 2025-06-20

• Efficient evidence-based genome annotation with EviAnnPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-05-12 · 9 citations

• Three annotated chromosome-level de novo genome assemblies of <i>Lomentospora prolificans</i> provide evidence for a chromosomal translocation event

  G3 Genes Genomes Genetics · 2025-04-24

• Three annotated chromosome-level <i>de novo</i> genome assemblies of <i>Lomentospora prolificans</i> provide evidence for a chromosomal translocation eventPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-01-22

• PSAURON: a tool for assessing protein annotation across a broad range of species

  NAR Genomics and Bioinformatics · 2024-12-22 · 24 citations

• WheresWalker: a pipeline for rapid mutation mapping using whole genome sequencingPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-08-17 · 5 citations