Ali Rahnavard

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• seqLens: optimizing language models for genomic predictions

  Molecular Biology and Evolution · 2026-06-23

• Table_13_Hospital antimicrobial stewardship: profiling the oral microbiome after exposure to COVID-19 and antibiotics.XLSX

  Figshare · 2026-04-29

• Guided tokenization and domain knowledge enhance genomic language models’ performance

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-02-18

• deepBreaks identifies and prioritizes genotype–phenotype associations using machine learning

  Scientific Reports · 2025-11-07

• Curating 16S rRNA databases enhances taxonomic accuracy and computational efficiency in microbial profilingPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-05 · 1 citations

• AB016. Towards understanding mechanisms of thymectomy benefit for myasthenia gravis

  Mediastinum · 2025-09-01

• <i>resLens</i> : genomic language models to enhance antibiotic resistance gene detectionPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-07-11 · 1 citations

• seqLens: optimizing language models for genomic predictionsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-03-14 · 2 citations

• Analysis of metagenomic data

  Nature Reviews Methods Primers · 2025-01-23 · 57 citations

• Machine learning enhances biomarker discovery: From multi- omics to functional genomics.

  Medical Research Archives · 2025-01-01 · 8 citations

• Metabolomic epidemiology offers insights into disease aetiology

  UNC Libraries · 2024-10-17

• Author Correction: Metabolomic epidemiology offers insights into disease aetiology

  UNC Libraries · 2024-10-17