B Bernstein

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Metastatic Osteosarcoma is Characterized by Loss of Osteoblastic Lineage Fidelity

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-06-12

• Multiomic analyses delineate human neuroendocrine tumor cell states in relation to normal enteroendocrine cell ontogeny

  Journal of Clinical Investigation · 2026-05-21

• Mapping active cis-regulatory elements from transcription initiation events

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-11

• Loss of tumor-infiltrating lymphocytes and poor response to immunotherapy in IDH GOF mutant melanoma

  JCI Insight · 2026-04-09

• Abstract 837: IDH mutations disable the tumor suppressive activity of GSX2 to promote gliomagenesis.

  Cancer Research · 2026-04-03

• Abstract PR001: Exploiting HIF-driven endogenous retroviral neoantigens to advance kidney cancer immunotherapy

  Cancer Research · 2026-03-13

• An expanded registry of candidate cis-regulatory elements

  Nature · 2026-01-07 · 29 citations

• High-throughput <i>in silico</i> screen uncovers key regulators of 3D genome architecture

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-12-11 · 1 citations

• High-throughput single-cell methylation resolves epigenetic states in hematopoietic differentiation and age-related clonal expansions

  Blood · 2025-11-03

• 119 Endogenous retroviruses as tumor-specific antigens in clear cell renal cell carcinoma: A new avenue for immunotherapy

  Regular and Young Investigator Award Abstracts · 2025-11-01

• TMOD-12. Preclinical and clinical assessment of chemoradiation after mutant IDH inhibitor treatment in IDH-mutant glioma

  Neuro-Oncology · 2025-11-01

• In vivo CRISPR screening in head and neck cancer reveals Uchl5 as an immunotherapy target

  Nature Communications · 2025-09-29 · 4 citations

• Loss of NOTCH2 creates a TRIM28-dependent vulnerability in small cell lung cancer

  Developmental Cell · 2025-08-26 · 1 citations

• Mutant IDH silences GSX2 to reprogram neural progenitor cell fate and promote gliomagenesisPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-08-13 · 1 citations

• The Somatic Mosaicism across Human Tissues Network

  Nature · 2025-07-02 · 42 citations

• Abstract CT215: Fibroblast growth factor receptor (FGFR) inhibition demonstrates anti-tumor activity in succinate dehydrogenase deficient gastrointestinal stromal tumor (SDHd GIST)

  Cancer Research · 2025-04-25 · 2 citations

• Programs, origins and immunomodulatory functions of myeloid cells in glioma

  Nature · 2025-02-26 · 105 citations

• Publisher Correction: The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

  Genome biology · 2025-02-13

• Multi-locus CRISPRi targeting with a single truncated guide RNA

  Nature Communications · 2025-02-04 · 5 citations

• A multi-modal transformer for cell type-agnostic regulatory predictions

  Cell Genomics · 2025-01-29 · 10 citations