Babak Alipanahi

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Orphan Non-Coding RNAs Drive Tumorigenesis and Enable Pre-Diagnostic Detection in HPV-Negative Head and Neck Cancer

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-12-25

• A multimodal cell-free RNA language model for liquid biopsy applications

  Nature Machine Intelligence · 2025-12-10 · 2 citations

• Combining cell-free DNA fragmentomes and total tumour volume improves prognostication and tumour response evaluation in patients with colorectal cancer liver metastases

  Zeitschrift für Gastroenterologie · 2025-09-01

• 816P Combining cell-free DNA fragmentomes and total tumour volume improves prognostication and tumour response evaluation in patients with colorectal cancer liver metastases

  Annals of Oncology · 2025-09-01

• Supplementary Table S1 from Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial Intelligence

  2025-08-01

• Supplementary Figure S2 from Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial IntelligencePreprint

  2025-08-01

• Supplementary Methods S1 from Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial IntelligencePreprint

  2025-08-01

• Data from Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial IntelligencePreprint

  2025-08-01

• Supplementary Table S2 from Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial Intelligence

  2025-08-01

• Supplementary Figure S1 from Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial IntelligencePreprint

  2025-08-01

• Author Correction: The effect of LRRK2 loss-of-function variants in humans

  UNC Libraries · 2025-05-14

• The effect of LRRK2 loss-of-function variants in humans

  UNC Libraries · 2025-05-14

• Detection of Early-Stage Colorectal Cancer Using Cell-Free oncRNA Biomarkers and Artificial Intelligence

  Clinical Cancer Research · 2025-05-14 · 6 citations

• Abstract 7133: Detection of early stage colorectal cancer using cell-free oncRNA biomarkers and AI

  Cancer Research · 2025-04-21

• A multi-modal cell-free RNA language model for liquid biopsy applicationsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-04-01 · 1 citations

• Deep generative AI models analyzing circulating orphan non-coding RNAs enable detection of early-stage lung cancer

  Nature Communications · 2024-11-21 · 41 citations

• 100P Predicting tumor ER and HER2 status using a cell-free RNA liquid biopsy assay

  Annals of Oncology · 2024-09-01