Full Professor(heuristic)

Genomics and Phylogenetic Studies · Molecular Biology

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h-index95
i10-index220
Publications355
Citations52,423

Grants

13 total · 4 active

NIH #R01HG014490

New methods for studying thousands of complete human and vertebrate genomes

Active
Amount
$600K–$700K
Period
2025-09-26 → 2029-06-30
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #U41HG010972

The Human Pangenome Reference Consortium Coordination Center

Active
Amount
$2M–$3M
Period
2019-09-18 → 2029-06-30
PIs
5

Awarded at WASHINGTON UNIVERSITY

NIH #U01CA309342

Pangenome-Aware Methods for Accurate Somatic Variant Discovery in Cancer Genomics

Active
Amount
$500K–$600K
Period
2026-05-01 → 2029-04-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

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All Grants

13 total · 4 active

NIH #R01HG014490

New methods for studying thousands of complete human and vertebrate genomes

Active
Amount
$600K–$700K
Period
2025-09-26 → 2029-06-30
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #U41HG010972

The Human Pangenome Reference Consortium Coordination Center

Active
Amount
$2M–$3M
Period
2019-09-18 → 2029-06-30
PIs
5

Awarded at WASHINGTON UNIVERSITY

NIH #U01CA309342

Pangenome-Aware Methods for Accurate Somatic Variant Discovery in Cancer Genomics

Active
Amount
$500K–$600K
Period
2026-05-01 → 2029-04-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #U01HG013748

Tools for comprehensive variant characterization using the pangenome

Active
Amount
$1M–$2M
Period
2024-09-23 → 2027-08-31
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #U24HG011853

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$1M–$2M
Period
2021-09-20 → 2026-06-30
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #OT2OD033761

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Amount
$1M–$2M
Period
2022-08-01 → 2025-07-31
PIs
3

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #U24HL148865

The LungMAP Data Coordination Center for Next Gen Systems Biology of Respiration

Amount
$1M–$2M
Period
2019-08-23 → 2024-07-31
PIs
4

Awarded at CINCINNATI CHILDRENS HOSP MED CTR

NIH #U01HG010961

The construction and utility of reference pan-genome graphs

Amount
$800K–$900K
Period
2023-02-04 → 2024-02-29
PIs
2

Awarded at DANA-FARBER CANCER INST

NIH #R01HG010485

Enabling Comparative Pangenomics

Amount
$600K–$700K
Period
2020-03-02 → 2023-12-31
PIs
4

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #U24HG010262

The AnVIL Data Ecosystem

Amount
$4M–$5M
Period
2018-09-19 → 2023-06-30
PIs
7

Awarded at BROAD INSTITUTE, INC.

NIH #OT2OD026682

Comprehensive, Flexible and FAIR Tools for the HuBMAP HIVE

Amount
$1M–$2M
Period
2021-06-21 → 2022-06-20
PIs
3

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #OT3HL142481

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

Amount
$8M–$9M
Period
2017-09-30 → 2022-03-30
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #R01HG009737

Dockstore - A Platform for Sharing Tools & Workflows on the Cloud Commons

Amount
$700K–$800K
Period
2017-08-29 → 2021-06-30
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

Recent Public Signals

  1. New preprint: Scalable and rare-variant aware genome inference across the 1kGP cohort2026-07-03
  2. New paper: Harmonizing standards and resources for the medical genome (Nature)2026-07-01
  3. New NIH award: Pangenome-Aware Methods for Accurate Somatic Variant Discovery in Cancer Genomics2026-05-01

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-09-03

Data may not be current

Find elsewhere

Institution / lab homepage Search on ResearchGate

ORCID: 0000-0001-8863-3539

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Career Trajectory