Full Professor(heuristic)

Genomics and Phylogenetic Studies · Molecular Biology

h-index95
i10-index220
Publications355
Citations52,423

Grants

50 total · 11 active

NIH #3OT2OD033761-01S3

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Expiring Soon
Amount
$1.0M
Period
2022-08-012026-07-31
PIs
2
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #1OT2OD033761-01

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Expiring Soon
Amount
$1.1M
Period
2022-08-012026-07-31
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #5U41HG010972-07

The Human Pangenome Reference Consortium Coordination Center

Active
Amount
$2.7M
Period
2019-09-182029-06-30
PIs
5
Est. capacity / PI
~2 students

Awarded at WASHINGTON UNIVERSITY

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

All Grants

50 total · 11 active

NIH #3OT2OD033761-01S3

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Expiring Soon
Amount
$1.0M
Period
2022-08-012026-07-31
PIs
2
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #1OT2OD033761-01

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Expiring Soon
Amount
$1.1M
Period
2022-08-012026-07-31
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #5U41HG010972-07

The Human Pangenome Reference Consortium Coordination Center

Active
Amount
$2.7M
Period
2019-09-182029-06-30
PIs
5
Est. capacity / PI
~2 students

Awarded at WASHINGTON UNIVERSITY

NIH #1R01HG014490-01

New methods for studying thousands of complete human and vertebrate genomes

Active
Amount
$633K
Period
2025-09-262029-06-30
PIs
2
Est. capacity / PI
~4 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #3U41HG010972-07S1

The Human Pangenome Reference Consortium Coordination Center

Active
Amount
$229K
Period
2019-09-182029-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #2U41HG010972-06

The Human Pangenome Reference Consortium Coordination Center

Active
Amount
$2.9M
Period
2019-09-182029-06-30
PIs
5
Est. capacity / PI
~2 students

Awarded at WASHINGTON UNIVERSITY

NIH #1U01CA309342-01

Pangenome-Aware Methods for Accurate Somatic Variant Discovery in Cancer Genomics

Active
Amount
$594K
Period
2026-05-012029-04-30
PIs
1
Est. capacity / PI
~9 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U24HG010262-08

Expanding the AnVIL Data Ecosystem

Active
Amount
$3.4M
Period
2018-09-192028-06-30
PIs
3
Est. capacity / PI
~3 students

Awarded at BROAD INSTITUTE, INC.

NIH #5U24HG010262-07

Expanding the AnVIL Data Ecosystem

Active
Amount
$3.4M
Period
2018-09-192028-06-30
PIs
3
Est. capacity / PI
~3 students

Awarded at BROAD INSTITUTE, INC.

NIH #2U24HG010262-06

Expanding the AnVIL Data Ecosystem

Active
Amount
$4.0M
Period
2018-09-192028-06-30
PIs
4
Est. capacity / PI
~3 students

Awarded at BROAD INSTITUTE, INC.

NIH #1U01HG013748-01

Tools for comprehensive variant characterization using the pangenome

Active
Amount
$1.7M
Period
2024-09-232027-08-31
PIs
3
Est. capacity / PI
~3 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #3U24HG011853-05S1

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$198K
Period
2021-09-202026-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U24HG011853-05

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$692K
Period
2021-09-202026-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U24HG011853-04

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$890K
Period
2021-09-202026-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U24HG011853-03

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$908K
Period
2021-09-202026-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U24HG011853-02

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$1.1M
Period
2021-09-202026-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #1U24HG011853-01

Dockstore: The Community Platform for Reproducible Biomedical Workflows and Applications

Amount
$1.1M
Period
2021-09-202026-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #3OT2OD033761-01S2

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Amount
$1.2M
Period
2022-08-012025-07-31
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #5R01HG010485-04

Enabling Comparative Pangenomics

Amount
$648K
Period
2020-03-022024-12-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U41HG010972-05

The WashU-UCSC-EBI Human Genome Reference Center

Amount
$2.7M
Period
2019-09-182024-08-31
PIs
4
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #3OT2OD033761-01S1

Computational tools for uniform processing and integration of human reference atlas data [2 of 5]

Amount
$900K
Period
2022-08-012024-07-31
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #5U41HG010972-04

The WashU-UCSC-EBI Human Genome Reference Center

Amount
$2.8M
Period
2019-09-182024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #5U41HG010972-03

The WashU-UCSC-EBI Human Genome Reference Center

Amount
$2.5M
Period
2019-09-182024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #3U41HG010972-03S1

The WashU-UCSC-EBI Human Genome Reference Center."

Amount
$250K
Period
2021-08-232024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #5U41HG010972-02

The WashU-UCSC-EBI Human Genome Reference Center

Amount
$2.5M
Period
2019-09-182024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #5U24HL148865-02

The LungMAP Data Coordination Center for Next Gen Systems Biology of Respiration

Amount
$1.5M
Period
2019-08-232024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at CINCINNATI CHILDRENS HOSP MED CTR

NIH #1U24HL148865-01

The LungMAP Data Coordination Center for Next Gen Systems Biology of Respiration

Amount
$1.2M
Period
2019-08-232024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at CINCINNATI CHILDRENS HOSP MED CTR

NIH #1U41HG010972-01

The WashU-UCSC-EBI Human Genome Reference Center

Amount
$2.6M
Period
2019-09-182024-07-31
PIs
4
Est. capacity / PI
~0 students

Awarded at WASHINGTON UNIVERSITY

NIH #3U01HG010961-03S1

The construction and utility of reference pan-genome graphs

Amount
$802K
Period
2023-02-042024-02-29
PIs
2
Est. capacity / PI
~0 students

Awarded at DANA-FARBER CANCER INST

NIH #5U01HG010961-03

The construction and utility of reference pan-genome graphs

Amount
$800K
Period
2020-03-012024-02-29
PIs
2
Est. capacity / PI
~0 students

Awarded at DANA-FARBER CANCER INST

NIH #5R01HG010485-03

Enabling Comparative Pangenomics

Amount
$648K
Period
2020-03-022023-12-31
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5R01HG010485-02

Enabling Comparative Pangenomics

Amount
$648K
Period
2020-03-022023-12-31
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #1R01HG010485-01A1

Enabling Comparative Pangenomics

Amount
$660K
Period
2020-03-022023-12-31
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5U24HG010262-05

The AnVIL Data Ecosystem

Amount
$4.5M
Period
2018-09-192023-06-30
PIs
6
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #3U24HG010262-04S1

The AnVIL Data Ecosystem

Amount
$983K
Period
2018-09-192023-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #5U24HG010262-04

The AnVIL Data Ecosystem

Amount
$4.5M
Period
2018-09-192023-06-30
PIs
7
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #3U24HG010262-04S2

The AnVIL Data Ecosystem DACReS Supplement

Amount
$113K
Period
2018-09-192023-06-30
PIs
7
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #3U24HG010262-03S2

The AnVIL Data Ecosystem

Amount
$217K
Period
2018-09-192023-06-30
PIs
7
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #3U24HG010262-03S1

The AnVIL Data Ecosystem

Amount
$500K
Period
2018-09-192023-06-30
PIs
7
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #5U24HG010262-03

The AnVIL Data Ecosystem

Amount
$4.5M
Period
2018-09-192023-06-30
PIs
7
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #5U24HG010262-02

The AnVIL Data Ecosystem

Amount
$5.0M
Period
2018-09-192023-06-30
PIs
7
Est. capacity / PI
~0 students

Awarded at BROAD INSTITUTE, INC.

NIH #5U01HG010961-02

The construction and utility of reference pan-genome graphs

Amount
$800K
Period
2020-03-012023-02-28
PIs
2
Est. capacity / PI
~0 students

Awarded at DANA-FARBER CANCER INST

NIH #1U01HG010961-01

The construction and utility of reference pan-genome graphs

Amount
$800K
Period
2020-03-012023-02-28
PIs
2
Est. capacity / PI
~0 students

Awarded at DANA-FARBER CANCER INST

NIH #3OT2OD026682-01S3

Comprehensive, Flexible and FAIR Tools for the HuBMAP HIVE

Amount
$1.0M
Period
2018-09-212022-09-20
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #5R01HG009737-04

Dockstore - A Platform for Sharing Tools & Workflows on the Cloud Commons

Amount
$691K
Period
2017-08-292022-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #3OT2OD026682-01S4

Comprehensive, Flexible and FAIR Tools for the HuBMAP HIVE

Amount
$1.3M
Period
2021-06-212022-06-20
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #3OT3HL142481-01S3

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

Amount
$8.8M
Period
2017-09-302022-03-30
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #5R01HG009737-03

Dockstore - A Platform for Sharing Tools & Workflows on the Cloud Commons

Amount
$781K
Period
2017-08-292021-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #3OT3HL142481-01S2

The Integration of Trans-omics for Precision Medicine (TOPMED) and Other Heart, Lung, Blood and Sleep (HLBS) Data Sets with the Data Commons

Amount
$7.7M
Period
2017-09-302020-09-28
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

NIH #3OT2OD026682-01S2

Comprehensive, flexible and FAIR Tools for the HuBMAP HIVE

Amount
$100K
Period
2019-06-212020-06-20
PIs
3
Est. capacity / PI
~0 students

Awarded at CARNEGIE-MELLON UNIVERSITY

Career Trajectory

Research Cluster Map

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