Bonnie Berger

Broad Institute

Full Professor(heuristic)

Protein Structure and Dynamics · Molecular Biology

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h-index86
i10-index262
Publications524
Citations34,899

Grants

10 total · 0 active

NIH #R35GM141861

Manifold representations and active learning for 21 st century biology

Amount
$400K–$500K
Period
2021-06-01 → 2026-05-31
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NIH #R01HG010959

Privacy-preserving genomic medicine at scale

Amount
$600K–$700K
Period
2020-09-18 → 2024-06-30
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NIH #U01CA250554

Developing high-throughput genetic perturbation strategies for single cells in cancer organoids

Amount
$900K–$1000K
Period
2020-07-08 → 2023-06-30
PIs
3

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

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All Grants

10 total · 0 active

NIH #R35GM141861

Manifold representations and active learning for 21 st century biology

Amount
$400K–$500K
Period
2021-06-01 → 2026-05-31
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NIH #R01HG010959

Privacy-preserving genomic medicine at scale

Amount
$600K–$700K
Period
2020-09-18 → 2024-06-30
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NIH #U01CA250554

Developing high-throughput genetic perturbation strategies for single cells in cancer organoids

Amount
$900K–$1000K
Period
2020-07-08 → 2023-06-30
PIs
3

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NIH #R01GM081871

Structure based Prediction of the interactome

Amount
$400K–$500K
Period
2008-04-01 → 2021-05-31
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NIH #R01GM108348

Compressive Genomics for Large Omics Data Sets: Algorithms, Applications and Tools

Amount
$300K–$400K
Period
2013-09-05 → 2020-08-31
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NSF #1506901

The Nineteenth International Conference on Research in Computational Molecular Biology (RECOMB 2015)

Amount
<$100K
Period
2015-02-01 → 2016-01-31
PIs
1

Awarded at Massachusetts Institute of Technology

NIH #T32HG004947

MIT/Whitehead/Broad Computational Genetics Training Program

Amount
$100K–$200K
Period
2009-07-08 → 2014-06-30
PIs
1

Awarded at MASSACHUSETTS INSTITUTE OF TECHNOLOGY

NSF #9711234

Collaborative Research: Building an Experimentally Constrained Local Rules Based Simulaator of Virus Shell Assembly

Amount
$200K–$300K
Period
1997-08-15 → 2001-07-31
PIs
1

Awarded at Massachusetts Institute of Technology

NSF #9501997

Career: Probabilistic Methods and Algorithms to Solve Protein Folding Problems

Amount
$100K–$200K
Period
1995-07-01 → 1999-08-31
PIs
1

Awarded at Massachusetts Institute of Technology

NSF #9007240

Mathematical and Computer Sciences: Postdoctoral Research Fellowship

Amount
<$100K
Period
1990-06-01 → 1992-05-31
PIs
1

Awarded at Individual Award

Recent Public Signals

  1. New preprint: Promera: a unified model for biomolecular structure prediction, filtering, and design2026-06-10
  2. New paper: SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins. (PubMed)2026-05-29

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-08-08

Data may not be current

Find elsewhere

Institution / lab homepage Search on ResearchGate

ORCID: 0000-0002-2724-7228

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