Full Professor(heuristic)

Genomics and Phylogenetic Studies · Molecular Biology

Compare more Molecular Biology professors.

h-index40
i10-index81
Publications238
Citations25,742

Grants

6 total · 1 active

NIH #R01GM157795

Research Framework for Innovation in Read Mapping

Active
Amount
$300K–$400K
Period
2026-05-01 → 2030-04-30
PIs
1

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R01HG012470

Improved genomic sketching for MUMmer and metagenomics

Amount
$400K–$500K
Period
2022-07-22 → 2026-05-31
PIs
2

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R01GM122935

Data Discovery: Computational Methods for Searching Short-Read Sequencing Experiments

Amount
$200K–$300K
Period
2017-05-01 → 2022-04-30
PIs
1

Awarded at CARNEGIE-MELLON UNIVERSITY

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All Grants

6 total · 1 active

NIH #R01GM157795

Research Framework for Innovation in Read Mapping

Active
Amount
$300K–$400K
Period
2026-05-01 → 2030-04-30
PIs
1

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R01HG012470

Improved genomic sketching for MUMmer and metagenomics

Amount
$400K–$500K
Period
2022-07-22 → 2026-05-31
PIs
2

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R01GM122935

Data Discovery: Computational Methods for Searching Short-Read Sequencing Experiments

Amount
$200K–$300K
Period
2017-05-01 → 2022-04-30
PIs
1

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R01HG007104

Algorithms for Managing Uncertainty in Chromosome Conformation Capture Data

Amount
$400K–$500K
Period
2013-09-23 → 2016-06-30
PIs
1

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R21HG006913

Fast k-mer Counting to Quantify Gene Expression and Improve Genome Assembly

Amount
$200K–$300K
Period
2012-08-01 → 2015-04-30
PIs
1

Awarded at CARNEGIE-MELLON UNIVERSITY

NIH #R21AI085376

Accurate Computational Detection of Influenza Reassortments

Amount
$100K–$200K
Period
2010-06-01 → 2012-05-31
PIs
1

Awarded at UNIV OF MARYLAND, COLLEGE PARK

Recent Public Signals

  1. New paper: Data-driven AI system for learning how to run transcript assemblers (Genome biology)2026-05-12
  2. New preprint: The Memory Curse: How Expanded Recall Erodes Cooperative Intent in LLM Agents2026-05-08
  3. New NIH award: Research Framework for Innovation in Read Mapping2026-05-01

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-09-03

Data may not be current

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