Cathy Wu

University of Delaware

Full Professor(heuristic)

Biomedical Text Mining and Ontologies · Molecular Biology

h-index66

i10-index181

Publications455

Citations49,389

Grants

50 total · 13 active

NIH #5R35GM141873-05

Protein Knowledge Networks and Semantic Computing for Disease Discovery

Expiring Soon

Amount: $433K
Period: 2021-08-25 → 2026-07-31
PIs: 1
Est. capacity / PI: ~0 students

NIH #5R35GM141873-04

Protein Knowledge Networks and Semantic Computing for Disease Discovery

Expiring Soon

Amount: $433K
Period: 2021-08-25 → 2026-07-31
PIs: 1
Est. capacity / PI: ~0 students

NIH #5R35GM141873-03

Protein Knowledge Networks and Semantic Computing for Disease Discovery

Expiring Soon

Amount: $433K
Period: 2021-08-25 → 2026-07-31
PIs: 1
Est. capacity / PI: ~0 students

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

Lab Funding Health

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In-Field Influence

0.0005

PageRank within Molecular Biology co-authorship network

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Admission Signals

New paper: Pretraining effective T5 generative models for clinical and biomedical applications (PLoS ONE)2026-04-17
New preprint: Measuring the State of Open Science in Transportation Using Large Language Models2026-01-20
New NIH award: $1,299K — UniProt Partnerships with Common Fund Data Ecosystem Resources for Protein-Centric Functional Genomics2024-09-17
New NIH award: $294K — Graduate Training Program in Computational Biology, Bioinformatics and Biomedical Data Science (CBB)2022-07-01
New NIH award: $81K — Practical Data-Centric AI/ML for Biomedical Researchers2022-07-01
New NIH award: $302K — Graduate Training Program in Computational Biology, Bioinformatics and Biomedical Data Science (CBB)2022-07-01
New NIH award: $291K — Graduate Training Program in Computational Biology, Bioinformatics and Biomedical Data Science (CBB)2022-07-01
New NIH award: $285K — Graduate Training Program in Computational Biology, Bioinformatics and Biomedical Data Science (CBB)2022-07-01
New NIH award: $433K — Protein Knowledge Networks and Semantic Computing for Disease Discovery2021-08-25
New NIH award: $433K — Protein Knowledge Networks and Semantic Computing for Disease Discovery2021-08-25

Data Freshness

Publications as of 2026-07-01
Grants as of 2026-06-30

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ORCID: 0000-0001-6379-8601

Career Trajectory

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Recent Publications

Last 2 years · showing 20 of 29

Pretraining effective T5 generative models for clinical and biomedical applications
PLoS ONE · 2026-04-17
Measuring the State of Open Science in Transportation Using Large Language Models
ArXiv.org · 2026-01-20
Measuring the State of Open Science in Transportation Using Large Language ModelsPreprint
arXiv (Cornell University) · 2026-01-20
DIFFERENTIAL CELLULAR RESPONSES TO ω-3 AND ω-6 FATTY ACIDS MEDIATED BY FFAR4 RECEPTOR IN LARGE YELLOW CROAKER (LARIMICHTHYS CROCEA)
Acta Hydrobiologica Sinica · 2025-11-25
Leveraging Social Determinants of Health (SDoH) Knowledge Graph to Identify Latent Patterns in Veteran Suicide Risk
2025-10-26 · 1 citations
KSMoFinder - Knowledge graph embedding of proteins and motifs for predicting kinases of human phosphositesPreprint
bioRxiv (Cold Spring Harbor Laboratory) · 2025-10-23 · 1 citations
AlphaOPT: Formulating Optimization Programs with Self-Improving LLM Experience LibraryPreprint
arXiv (Cornell University) · 2025-10-21
Predicting Behavioral Determinants of Health from Clinical Text Using Transformer Models and BiLSTMPreprint
medRxiv · 2025-10-15
Desiderata for a biomedical knowledge network: opportunities, challenges and future Directions.
PubMed · 2025-09-26
A Roadmap for Climate-Relevant Robotics ResearchPreprint
ArXiv.org · 2025-07-15
When Context Is Not Enough: Modeling Unexplained Variability in Car-Following BehaviorPreprint
ArXiv.org · 2025-07-09
Learning to Segment for Vehicle Routing ProblemsPreprint
ArXiv.org · 2025-06-22
The UniProt website API: facilitating programmatic access to protein knowledge
Nucleic Acids Research · 2025-05-07 · 137 citations
Explaining GitHub Actions Failures with Large Language Models: Challenges, Insights, and Limitations
2025-04-27 · 4 citations
Route Recommendations for Traffic Management Under Learned Partial Driver CompliancePreprint
ArXiv.org · 2025-04-03
Learning-Guided Rolling Horizon Optimization for Long-Horizon Flexible Job-Shop SchedulingPreprint
ArXiv.org · 2025-02-18 · 1 citations
NeuralMOVES: A lightweight and microscopic vehicle emission estimation model based on reverse engineering and surrogate learningPreprint
ArXiv.org · 2025-02-06
Explaining GitHub Actions Failures with Large Language Models: Challenges, Insights, and LimitationsPreprint
ArXiv.org · 2025-01-27
Neuralmoves: A Lightweight and Microscopic Vehicle Emission Estimation Model Based on Reverse Engineering and Surrogate LearningPreprint
SSRN Electronic Journal · 2025-01-01 · 2 citations
KSMoFinder—knowledge graph embedding of proteins and motifs for predicting kinases of human phosphosites
Bioinformatics Advances · 2024-12-26 · 1 citations

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