Full Professor(heuristic)

Biomedical Text Mining and Ontologies · Molecular Biology

h-index41
i10-index151
Publications429
Citations6,784

Grants

48 total · 21 active

NIH #5U01AG088076-02

Standardizing and Harmonizing Behavioral and Social Science Research Factors in Alzheimer's Disease through Ontology-Based Approaches

Active
Amount
$752K
Period
2024-09-012029-08-31
PIs
2
Est. capacity / PI
~3 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #1U01AG088076-01

Standardizing and Harmonizing Behavioral and Social Science Research Factors in Alzheimer's Disease through Ontology-Based Approaches

Active
Amount
$801K
Period
2024-09-012029-08-31
PIs
2
Est. capacity / PI
~4 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #7R24ES036131-02

Semantics Standards and Tools for Spatial and Contextual Exposome Data

Active
Amount
$656K
Period
2025-07-152029-06-30
PIs
3
Est. capacity / PI
~2 students

Awarded at INDIANA UNIVERSITY INDIANAPOLIS

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

All Grants

48 total · 21 active

NIH #5U01AG088076-02

Standardizing and Harmonizing Behavioral and Social Science Research Factors in Alzheimer's Disease through Ontology-Based Approaches

Active
Amount
$752K
Period
2024-09-012029-08-31
PIs
2
Est. capacity / PI
~3 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #1U01AG088076-01

Standardizing and Harmonizing Behavioral and Social Science Research Factors in Alzheimer's Disease through Ontology-Based Approaches

Active
Amount
$801K
Period
2024-09-012029-08-31
PIs
2
Est. capacity / PI
~4 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #7R24ES036131-02

Semantics Standards and Tools for Spatial and Contextual Exposome Data

Active
Amount
$656K
Period
2025-07-152029-06-30
PIs
3
Est. capacity / PI
~2 students

Awarded at INDIANA UNIVERSITY INDIANAPOLIS

NIH #5U01AT012871-02

COMBINI: connecting COmplementary Medicine evidence and BIological kNowledge to support Integrative Health

Active
Amount
$577K
Period
2024-09-172029-06-30
PIs
3
Est. capacity / PI
~2 students

Awarded at UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN

NIH #1U01AT012871-01

COMBINI: connecting COmplementary Medicine evidence and BIological kNowledge to support Integrative Health

Active
Amount
$671K
Period
2024-09-172029-06-30
PIs
3
Est. capacity / PI
~2 students

Awarded at UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN

NIH #5U24AG088019-03

ACCELERATE-BASSO: Coordinating Center for Accelerating Behavioral and Social Science through Ontology

Active
Amount
$744K
Period
2024-09-202029-05-31
PIs
3
Est. capacity / PI
~2 students

Awarded at INDIANA UNIVERSITY INDIANAPOLIS

NIH #7U24AG088019-02

ACCELERATE-BASSO: Coordinating Center for Accelerating Behavioral and Social Science through Ontology

Active
Amount
$802K
Period
2024-09-202029-05-31
PIs
3
Est. capacity / PI
~2 students

Awarded at INDIANA UNIVERSITY INDIANAPOLIS

NIH #5U24MH136069-02

Coordinating Individually Measured Phenotypes to Advance Mental Health Research

Active
Amount
$1.6M
Period
2024-07-152029-04-30
PIs
3
Est. capacity / PI
~5 students

Awarded at YALE UNIVERSITY

NIH #3U24MH136069-02S1

Coordinating Individually Measured Phenotypes to Advance Mental Health Research

Active
Amount
$978K
Period
2024-07-152029-04-30
PIs
3
Est. capacity / PI
~3 students

Awarded at YALE UNIVERSITY

NIH #1U24MH136069-01

Coordinating Individually Measured Phenotypes to Advance Mental Health Research

Active
Amount
$1.7M
Period
2024-07-152029-04-30
PIs
3
Est. capacity / PI
~5 students

Awarded at YALE UNIVERSITY

NIH #5R01AG084236-04

ACTS (AD Clinical Trial Simulation): Developing Advanced Informatics Approaches for an Alzheimer's Disease Clinical Trial Simulation System

Active
Amount
$993K
Period
2023-09-012028-05-31
PIs
3
Est. capacity / PI
~2 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #5R01AG084236-03

ACTS (AD Clinical Trial Simulation): Developing Advanced Informatics Approaches for an Alzheimer's Disease Clinical Trial Simulation System

Active
Amount
$974K
Period
2023-09-012028-05-31
PIs
3
Est. capacity / PI
~2 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #7R01AG084236-02

ACTS (AD Clinical Trial Simulation): Developing Advanced Informatics Approaches for an Alzheimer's Disease Clinical Trial Simulation System

Active
Amount
$1.0M
Period
2023-09-012028-05-31
PIs
3
Est. capacity / PI
~2 students

Awarded at MAYO CLINIC JACKSONVILLE

NIH #5U24AI171008-05

VIOLIN 2.0: Vaccine Information and Ontology LInked kNowledgebase

Active
Amount
$729K
Period
2022-08-192027-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF MICHIGAN AT ANN ARBOR

NIH #5R01AG083039-03

An end-to-end informatics framework to study Multiple Chronic Conditions (MCC)'s impact on Alzheimer's disease using harmonized electronic health records

Active
Amount
$1.1M
Period
2023-09-012027-05-31
PIs
3
Est. capacity / PI
~1 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5U24AI171008-04

VIOLIN 2.0: Vaccine Information and Ontology LInked kNowledgebase

Active
Amount
$726K
Period
2022-08-192027-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF MICHIGAN AT ANN ARBOR

NIH #5U24AI171008-03

VIOLIN 2.0: Vaccine Information and Ontology LInked kNowledgebase

Active
Amount
$740K
Period
2022-08-192027-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF MICHIGAN AT ANN ARBOR

NIH #5U24AI171008-02

VIOLIN 2.0: Vaccine Information and Ontology LInked kNowledgebase

Active
Amount
$744K
Period
2022-08-192027-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF MICHIGAN AT ANN ARBOR

NIH #1U24AI171008-01

VIOLIN 2.0: Vaccine Information and Ontology LInked kNowledgebase

Active
Amount
$754K
Period
2022-08-192027-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF MICHIGAN AT ANN ARBOR

NIH #5R01AG072799-04

Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language Processing

Active
Amount
$822K
Period
2021-05-012027-04-30
PIs
3
Est. capacity / PI
~0 students

Awarded at YALE UNIVERSITY

NIH #4R01AG072799-03

Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language Processing

Active
Amount
$873K
Period
2021-05-012027-04-30
PIs
3
Est. capacity / PI
~0 students

Awarded at YALE UNIVERSITY

NIH #5R01AG083039-02

An end-to-end informatics framework to study Multiple Chronic Conditions (MCC)'s impact on Alzheimer's disease using harmonized electronic health records

Amount
$1.1M
Period
2023-09-012026-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1R01AG083039-01

An end-to-end informatics framework to study Multiple Chronic Conditions (MCC)'s impact on Alzheimer's disease using harmonized electronic health records

Amount
$1.2M
Period
2023-09-012026-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1R24ES036131-01

Semantics Standards and Tools for Spatial and Contextual Exposome Data

Amount
$653K
Period
2024-06-252025-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF FLORIDA

NIH #5R56AG074604-02

CICADA: clinical informatics and computational approaches for drug-repositioning of AD/ADRD

Amount
$754K
Period
2021-09-302025-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF PENNSYLVANIA

NIH #7RF1AG072799-02

Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language Processing

Amount
$1.2M
Period
2021-05-012025-04-30
PIs
3
Est. capacity / PI
~0 students

Awarded at YALE UNIVERSITY

NIH #3R01AG066749-01S1

Finding Combinatorial Drug Repositioning Therapy For Alzheimer'S Disease And Related Dementias

Amount
$390K
Period
2020-04-012025-03-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1U24AG088019-01

ACCELERATE-BASSO: Coordinating Center for Accelerating Behavioral and Social Science through Ontology

Amount
$798K
Period
2024-09-202025-01-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF FLORIDA

NIH #5R01AI130460-05

Dynamic learning for post-vaccine event prediction using temporal information in VAERS

Amount
$669K
Period
2017-02-012024-01-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1R01AG084236-01

ACTS (AD Clinical Trial Simulation): Developing Advanced Informatics Approaches for an Alzheimer's Disease Clinical Trial Simulation System

Amount
$1.2M
Period
2023-09-012024-01-15
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5U24CA194215-05

Advancing Cancer Pharmacoepidemiology Research Through EHRs and Informatics

Amount
$618K
Period
2016-09-012023-08-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1R01CA224432-01A1

The MC1R protein palmitoylation in melanoma development

Amount
$386K
Period
2018-09-192023-08-31
PIs
1
Est. capacity / PI
~0 students

Awarded at BOSTON UNIVERSITY MEDICAL CAMPUS

NIH #1R56AG074604-01

CICADA: clinical informatics and computational approaches for drug-repositioning of AD/ADRD

Amount
$794K
Period
2021-09-302023-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF PENNSYLVANIA

NIH #1RF1AG072799-01

Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language Processing

Amount
$1.1M
Period
2021-05-012023-01-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1R56AI150272-01A1

Using big data and deep learning on predicting HIV transmission risk in MSM population

Amount
$801K
Period
2020-09-012022-08-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5R01AI130460-04

Dynamic learning for post-vaccine event prediction using temporal information in VAERS

Amount
$766K
Period
2017-02-012022-01-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #3R01AI130460-03S1

Dynamic learning for post-vaccine event prediction using temporal information in VAERS

Amount
$97K
Period
2017-02-012022-01-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5R01AI130460-03

Dynamic learning for post-vaccine event prediction using temporal information in VAERS

Amount
$619K
Period
2017-02-012022-01-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5R01AI130460-02

Dynamic learning for post-vaccine event prediction using temporal information in VAERS

Amount
$619K
Period
2017-02-012022-01-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #1R01AI130460-01

Dynamic learning for post-vaccine event prediction using temporal information in VAERS

Amount
$645K
Period
2017-02-012022-01-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5R01CA193913-03

Molecular connections among UV exposure, red hair, nevi and melanoma

Amount
$339K
Period
2015-12-012020-11-30
PIs
1
Est. capacity / PI
~0 students

Awarded at BOSTON UNIVERSITY MEDICAL CAMPUS

NIH #5R01CA193913-02

Molecular connections among UV exposure, red hair, nevi and melanoma

Amount
$376K
Period
2015-12-012020-11-30
PIs
1
Est. capacity / PI
~0 students

Awarded at BOSTON UNIVERSITY MEDICAL CAMPUS

NIH #5R01LM011829-05

Patient Medical History Representation, Extraction, and Inference from EHR Data

Amount
$335K
Period
2014-09-012020-08-31
PIs
1
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5U01HG009454-03

Metadata applications on informed content to facilitate biorepository data regulation and sharing

Amount
$431K
Period
2016-09-282020-07-31
PIs
1
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5R01CA193913-04

Molecular connections among UV exposure, red hair, nevi and melanoma

Amount
$366K
Period
2015-12-012019-11-30
PIs
1
Est. capacity / PI
~0 students

Awarded at BOSTON UNIVERSITY MEDICAL CAMPUS

NIH #5R01LM011829-04

Patient Medical History Representation, Extraction, and Inference from EHR Data

Amount
$335K
Period
2014-09-012019-08-31
PIs
1
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5U01HG009454-02

Metadata applications on informed content to facilitate biorepository data regulation and sharing

Amount
$457K
Period
2016-09-282019-07-31
PIs
1
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON

NIH #5R01CA196896-03

Why red-haired individuals are so prone to developing melanoma

Amount
$374K
Period
2015-07-152018-06-30
PIs
1
Est. capacity / PI
~0 students

Awarded at BOSTON UNIVERSITY MEDICAL CAMPUS

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

Potential Collaborators

Recent Publications

Last 2 years · showing 6 of 6
Open author page on OpenAlex →