Daniel Blankenberg

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• github.com/iwc-workflows/fastq-to-matrix-10x/scrna-seq-fastq-to-matrix-10x-v3

  Zenodo (CERN European Organization for Nuclear Research) · 2026-06-24

• Quantum hyperdimensional computing: a foundational paradigm for quantum neuromorphic architectures

  npj Unconventional Computing · 2026-05-04

• MetaSBT Viruses database

  Zenodo (CERN European Organization for Nuclear Research) · 2026-04-29

• QuMod: Parallel Quantum Job Scheduling on Modular QPUs using Circuit Cutting

  arXiv (Cornell University) · 2026-04-13

• QuMod: Parallel Quantum Job Scheduling on Modular QPUs using Circuit CuttingPreprint

  arXiv (Cornell University) · 2026-04-13

• Structural Basis of M1 Muscarinic and H3 Histamine Receptor Inhibition in OPC Differentiation

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-04-02

• Designing vector-symbolic architectures for biomedical applications: ten tips and common pitfalls

  PeerJ Computer Science · 2026-03-10

• hdlib 2.0: Extending Machine Learning Capabilities of Vector-Symbolic ArchitecturesPreprint

  arXiv (Cornell University) · 2026-01-05

• hdlib 2.0: Extending Machine Learning Capabilities of Vector-Symbolic Architectures

  ArXiv.org · 2026-01-05

• An Automatic Pipeline for the Integration of Python-Based Tools into the Galaxy Platform: Application to the anvi'o Framework

  ArXiv.org · 2026-01-05

• An Automatic Pipeline for the Integration of Python-Based Tools into the Galaxy Platform: Application to the anvi'o FrameworkPreprint

  arXiv (Cornell University) · 2026-01-05

• GAIA-C (Galaxy Air Investigation and Analysis for Citizens) - A scalable Galaxy workflow interface for air pollution researchPreprint

  SSRN Electronic Journal · 2026-01-01

• R2G2: A Python-R Framework for Seamless Integration of R/Bioconductor Tools into Galaxy

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-12-24

• A Survey on Efficient Protein Language ModelsPreprint

  Preprints.org · 2025-12-24 · 1 citations

• QuFlex: Parallel Quantum Job Scheduling using Adaptive Circuit Cutting

  2025-12-09 · 1 citations

• Designing Vector-Symbolic Architectures for Biomedical Applications: Ten Tips and Common PitfallsPreprint

  Preprints.org · 2025-10-02

• Efficient Quantum Protein Structure Prediction with Problem-Agnostic AnsatzesPreprint

  ArXiv.org · 2025-09-22

• Predicting the toxicity of chemical compounds via Hyperdimensional ComputingPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-21 · 1 citations

• A novel Vector-Symbolic Architecture for graph encoding and its application to viral pangenome-based species classificationPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-10 · 1 citations

• GalaxyQ: A Platform for Reproducible and Provenance-Driven Hybrid Quantum-Classical Scientific Workflows

  2025-08-30