Gunnar Rätsch

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• The chromatin guardian ATRX is a strong prognostic biomarker in melanoma

  Scientific Reports · 2025-12-18

• Data-Driven Discovery of Feature Groups in Clinical Time SeriesPreprint

  ArXiv.org · 2025-11-11

• Development and Validation of Novel Residual Risk Scores for Patients With ASCVD

  Repository for Publications and Research Data (ETH Zurich) · 2025-11-01

• Perturbation-aware representation learning for <i>in vivo</i> genetic screensPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-10-15

• Efficient and accurate search in petabase-scale sequence repositories

  Nature · 2025-10-08 · 12 citations

• DeepSpot2Cell: Predicting Virtual Single-Cell Spatial Transcriptomics from H&amp;E images using Spot-Level SupervisionPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-25

• Revisiting Automatic Data Curation for Vision Foundation Models in Digital Pathology

  Lecture notes in computer science · 2025-09-18 · 1 citations

• Splicing neoepitope prediction is sensitive to methodological differencesPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-16 · 1 citations

• ImmunoPepper: extracting personalized peptides from complex splicing graphs

  Bioinformatics · 2025-09-03

• Histopathology-based protein multiplex generation using deep learning

  Nature Machine Intelligence · 2025-08-04 · 15 citations

• Molecularly informed analysis of histopathology images using natural languagePreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-07-18

• DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&amp;E Images

  Repository for Publications and Research Data (ETH Zurich) · 2025-07-09

• What makes clinical machine learning fair? A practical ethics framework

  PLOS Digital Health · 2025-03-18 · 7 citations

• Author Correction: Genomic basis for RNA alterations in cancer

  UNC Libraries · 2025-03-13

• Generalizable Single-Source Cross-Modality Medical Image Segmentation via Invariant Causal Mechanisms

  2025-02-26 · 4 citations

• DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&amp;E ImagesPreprint

  medRxiv · 2025-02-12 · 12 citations

• Towards Foundation Models for Critical Care Time SeriesPreprint

  arXiv (Cornell University) · 2024-11-25 · 3 citations

• Generalizable Single-Source Cross-modality Medical Image Segmentation via Invariant Causal MechanismsPreprint

  arXiv (Cornell University) · 2024-11-07

• Uncertainty-Penalized Direct Preference OptimizationPreprint

  arXiv (Cornell University) · 2024-10-26

• Towards Dynamic Feature Acquisition on Medical Time Series by Maximizing Conditional Mutual InformationPreprint

  arXiv (Cornell University) · 2024-07-18