Full Professor(heuristic)

Viral gastroenteritis research and epidemiology · Infectious Diseases

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h-index57
i10-index159
Publications257
Citations16,020

Grants

7 total · 2 active

NIH #R01HG013117

Scalable Computational Methods for Genealogical Inference: from species level to single cells

Active
Amount
$500K–$600K
Period
2024-09-10 → 2028-06-30
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NIH #R01GM080203

Developing the Apollo software for high-throughput annotation of multiple genomes

Active
Amount
$400K–$500K
Period
2007-08-01 → 2027-08-31
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NIH #R56HG013117

Scalable Computational Methods for Genealogical Inference: from species level to single cells

Amount
$300K–$400K
Period
2023-09-01 → 2024-09-14
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

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All Grants

7 total · 2 active

NIH #R01HG013117

Scalable Computational Methods for Genealogical Inference: from species level to single cells

Active
Amount
$500K–$600K
Period
2024-09-10 → 2028-06-30
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NIH #R01GM080203

Developing the Apollo software for high-throughput annotation of multiple genomes

Active
Amount
$400K–$500K
Period
2007-08-01 → 2027-08-31
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NIH #R56HG013117

Scalable Computational Methods for Genealogical Inference: from species level to single cells

Amount
$300K–$400K
Period
2023-09-01 → 2024-09-14
PIs
3

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NSF #2031120

CIBR:BBSRC: Next generation collaborative annotation of genomes and synteny

Amount
$900K–$1000K
Period
2020-08-01 → 2023-07-31
PIs
1

Awarded at University of California-Berkeley

NIH #R01HG004483

Enhancements to the GMOD Suite of Genome Annotation and Visualization Tools

Amount
$700K–$800K
Period
2007-09-01 → 2023-04-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NIH #U24CA220441

Developing the JBrowse Genome Browser to Visualize Structural Variants and Cancer Genomics Data

Amount
$700K–$800K
Period
2017-08-01 → 2021-07-31
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

NIH #R01GM076705

Evolutionary Modeling/Prediction of ncRNA Genes in Flies

Amount
$200K–$300K
Period
2006-02-01 → 2012-01-31
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA BERKELEY

Recent Public Signals

  1. New preprint: Apollo 3: Multi-Species Genome Curation2026-06-11
  2. New paper: Proteins in the Genome Browser: Integration of Phylogenies, Alignments, and Structures With Nucleotide-level Evidence in JBrowse 2 (Journal of Molecular Biology)2026-01-01
  3. New NIH award: Scalable Computational Methods for Genealogical Inference: from species level to single cells2024-09-10

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-09-03

Data may not be current

Find elsewhere

Institution / lab homepage Search on ResearchGate

ORCID: 0000-0001-7639-5369

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