Jianlin Cheng

University of Missouri Health System

Full Professor(heuristic)

Protein Structure and Dynamics · Molecular Biology

h-index68

i10-index236

Publications513

Citations23,715

Grants

17 total · 0 active

NIH #5R01GM146340-04

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Amount: $301K
Period: 2022-09-20 → 2026-05-31
PIs: 1
Est. capacity / PI: ~0 students

Awarded at UNIVERSITY OF MISSOURI-COLUMBIA

NIH #5R01GM146340-03

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Amount: $302K
Period: 2022-09-20 → 2026-05-31
PIs: 1
Est. capacity / PI: ~0 students

Awarded at UNIVERSITY OF MISSOURI-COLUMBIA

NIH #5R01GM146340-02

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Amount: $303K
Period: 2022-09-20 → 2026-05-31
PIs: 1
Est. capacity / PI: ~0 students

Awarded at UNIVERSITY OF MISSOURI-COLUMBIA

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

Potential Collaborators

Recent Publications

Last 2 years · showing 20 of 70

GRNFormer: accurate gene regulatory network inference using graph transformer
Bioinformatics · 2026-03-23 · 1 citations
Flow matching for generative modeling in bioinformatics and computational biology
2025-12-03
ETSAM: Effectively Segmenting Cell Membranes in cryo-Electron TomogramsPreprint
bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-26
Boosting AlphaFold protein tertiary structure prediction through MSA engineering and extensive model sampling and ranking in CASP16
Communications Biology · 2025-11-17 · 3 citations
Enhancer Rewiring Orchestrates Inflammation and Loss of Cell Identity During Muscle Stem Cell Aging
Aging Cell · 2025-11-14 · 3 citations
Multimodal deep learning integration of cryo-EM and AlphaFold3 for high-accuracy protein structure determination
Communications Chemistry · 2025-10-31 · 5 citations
MPBind: a multitask protein binding site predictor using protein language models and equivariant GNNs
Bioinformatics · 2025-10-23 · 1 citations
Beckwith–Wiedemann syndrome and large offspring syndrome involve alterations in methylome, transcriptome, and chromatin configuration
NAR Molecular Medicine · 2025-10-01
How to go with the flow: flow matching in bioinformatics and computational biologyPreprint
2025-09-22 · 2 citations
CryoFSL: An Annotation-Efficient, Few-Shot Learning Framework for Robust Protein Particle Picking in Cryo-EM MicrographsPreprint
bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-21 · 1 citations
How to go with the flow: flow matching in bioinformatics and computational biology
2025-08-29
Machine learning methods for gene regulatory network inference
Briefings in Bioinformatics · 2025-08-23 · 16 citations
Highlights of Model Quality Assessment in <scp>CASP16</scp>
Proteins Structure Function and Bioinformatics · 2025-08-14
How to go with the flow: flow matching in bioinformatics and computational biologyPreprint
2025-07-29
Atomistic Modeling of Bio-Nano Hybrids: Interactions between Iron Oxide Nanoparticles and the Outer Membrane of <i>Shewanella</i>
ACS Biomaterials Science & Engineering · 2025-07-24
Multimodal deep learning integration of cryo-EM and AlphaFold3 for high-accuracy protein structure determinationPreprint
Research Square · 2025-07-22
Unavailability of experimental 3D structural data on protein folding dynamics and necessity for a new generation of structure prediction methods in this context.Preprint
PubMed · 2025-07-10
Multimodal deep learning integration of cryo-EM and AlphaFold3 for high-accuracy protein structure determinationPreprint
bioRxiv (Cold Spring Harbor Laboratory) · 2025-07-03 · 4 citations
Guest Editorial for Special Section on ACM BCB 2023
IEEE Transactions on Computational Biology and Bioinformatics · 2025-07-01
<scp>FlowDock</scp>: Geometric flow matching for generative protein–ligand docking and affinity prediction
Bioinformatics · 2025-07-01 · 11 citations

Open author page on OpenAlex →

Jianlin Cheng

Grants

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

All Grants

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Acquiring a GPU server to accelerate developing deep learning methods to reconstruct protein structures from cryo-EM data

Deep learning methods for automated and accurate reconstruction of protein structures from cryo-EM image data

Distance-based ab initio protein structure prediction

Distance-based ab initio protein structure prediction

Distance-based ab initio protein structure prediction

Distance-based ab initio protein structure prediction

Integrated Prediction and Validation of Protein Structures

Integrated Prediction and Validation of Protein Structures

Integrated Prediction and Validation of Protein Structures

Integrated Prediction and Validation of Protein Structures

Integrated Prediction of Protein Struture at 1D, 2D and 3D Levels

Integrated Prediction of Protein Struture at 1D, 2D and 3D Levels

Integrated Prediction of Protein Struture at 1D, 2D and 3D Levels

Integrated Prediction of Protein Struture at 1D, 2D and 3D Levels

Career Trajectory

Research Cluster Map

Potential Collaborators

Recent Publications