John A. Capra

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Discovering latent subtypes of preterm birth and genetic risk using tensor decomposition on electronic health recordsPreprint

  medRxiv · 2025-11-19

• Evaluating the contribution of genome 3D folding to variation in human height using machine learningPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-15

• Diagnostic Reversion in Dementia Care: A Real-World Analysis of Mild Cognitive Impairment Diagnoses Following Dementia in a Large Electronic Medical Record SystemPreprint

  medRxiv · 2025-07-17

• Precision medicine: Crossing the biomedical scales with AI

  The Journal of Precision Medicine Health and Disease · 2025-07-01 · 3 citations

• Comparing chromatin contact maps at scale: methods and insights

  Nature Methods · 2025-03-19 · 4 citations

• Exposure to autoimmune disorders is associated with increased Alzheimer’s disease risk in a multi-site electronic health record analysis

  Cell Reports Medicine · 2025-02-24 · 7 citations

• Author response: Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning

  2025-02-17

• Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning

  eLife · 2025-02-17 · 5 citations

• Pre-conception clinical risk factors differ between spontaneous and indicated preterm birth in a densely phenotyped EHR cohort

  BMC Pregnancy and Childbirth · 2025-02-12 · 6 citations

• Methylation Clocks Do Not Predict Age or Alzheimer’s Disease Risk Across Genetically Admixed IndividualsPreprint

  eLife · 2025-01-31 · 4 citations

• Author response: Methylation Clocks Do Not Predict Age or Alzheimer’s Disease Risk Across Genetically Admixed Individuals

  2025-01-31

• Methylation Clocks Do Not Predict Age or Alzheimer’s Disease Risk Across Genetically Admixed IndividualsPreprint

  eLife · 2025-01-31

• Author response: Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning

  2025-01-23

• Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanningPreprint

  eLife · 2025-01-23

• Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanningPreprint

  eLife · 2024-10-28

• Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning

  eLife · 2024-10-28 · 12 citations

• Methylation Clocks Do Not Predict Age or Alzheimer’s Disease Risk Across Genetically Admixed IndividualsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-10-18 · 9 citations

• Machine Learning Reveals the Diversity of Human 3D Chromatin Contact Patterns

  Molecular Biology and Evolution · 2024-10-01 · 11 citations

• Sequence-Based Machine Learning Reveals 3D Genome Differences between Bonobos and Chimpanzees

  Genome Biology and Evolution · 2024-10-01 · 8 citations

• Cell‐Specific Transposable Element and Gene Expression Analysis Across Systemic Lupus Erythematosus Phenotypes

  ACR Open Rheumatology · 2024-08-14 · 7 citations