José Juan Almagro Armenteros

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Publisher Correction: The impact of exercise on gene regulation in association with complex trait genetics

  Nature Communications · 2026-04-27

• Multi-omic identification of key transcriptional regulatory programs during endurance exercise training in rats

  Nature Communications · 2026-03-21

• Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models with PathogenFinder2

  Bioinformatics · 2026-03-21 · 2 citations

• Abstract 4367025: Multi-omics analysis of endurance exercise reveals cardioprotective remodeling in rat heart

  Circulation · 2025-11-03

• Improved reconstruction of single-cell developmental potential with CytoTRACE 2

  Nature Methods · 2025-10-27 · 58 citations

• Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models, with PathogenFinder2Preprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-04-18 · 22 citations