Justas Dauparas

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Small-molecule binding and sensing with a designed protein family

  Nature Communications · 2026-03-28 · 5 citations

• Modeling protein–small molecule conformational ensembles with PLACER

  Proceedings of the National Academy of Sciences · 2025-11-04 · 9 citations

• Atomic context-conditioned protein sequence design using LigandMPNN

  Nature Methods · 2025-03-28 · 177 citations

• Implicit modeling of the conformational landscape and sequence allows scoring and generation of stable proteinsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-12-22 · 2 citations

• Modeling protein-small molecule conformational ensembles with PLACERPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-09-25 · 17 citations

• Binding and sensing diverse small molecules using shape-complementary pseudocycles

  Science · 2024-07-18 · 83 citations