Jyoti Shetty

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Abstract 1510: CASTLE: long-read sequencing panel of cancer cell lines to improve standards of somatic variant calling and benchmarking

  Cancer Research · 2026-04-03

• Wakhan: reconstruction of chromosome-scale copy number profiles of tumor genomes with long-read sequencing

  medRxiv · 2025-12-15

• Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic

  Nature Biotechnology · 2025-10-16 · 17 citations

• Abstract 2848: Severus: A tool for detecting and characterizing complex structural variants in cancer using long-read sequencing

  Cancer Research · 2025-04-21

• Abstract 5136: Unraveling SMARCA1’s role in cancer progression, drug resistance, and muscle differentiation through EMT-related signaling, TGF-β pathway, and key transcription factors SNAI1 and EGR1

  Cancer Research · 2025-04-21

• Abstract 7436: DeepSomatic: A SNV and small-indel somatic caller using deep neural networks

  Cancer Research · 2025-04-21

• Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing

  Nature Biotechnology · 2025-04-04 · 24 citations

• DeepSomatic: Accurate somatic small variant discovery for multiple sequencing technologiesPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-08-19 · 17 citations