Kevin R. Coombes

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Tissue-aware elastic net decomposition reveals shared and lineage-specific drug response biomarkers

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-06-25

• scDIG: An R Shiny Application for Interactive Density-Based Gating of Single-Cell Proteomic and Transcriptomic Data

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-22

• Race-associated genomic and transcriptomic features and outcomes in high-risk endometrial cancer: A cancer moonshot and NRG oncology/GOG-210 study

  Gynecologic Oncology · 2026-04-23

• WayFindR: Investigating Feedback in Biological Pathways

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-31

• Supplementary Excel Files for "Clustering Digestive Tract Tumors Using Transcriptomic and Mutation Data"

  Zenodo (CERN European Organization for Nuclear Research) · 2026-03-30

• Supplementary Excel Files for "Clustering Digestive Tract Tumors Using Transcriptomic and Mutation Data"

  Zenodo (CERN European Organization for Nuclear Research) · 2026-03-30

• WayFindR: investigating feedback in biological pathways

  NAR Genomics and Bioinformatics · 2026-03-27

• A shape-constrained regression and wild bootstrap framework for reproducible drug synergy testing

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-02-09

• Widespread data leakage inflates accuracy and corrupts biomarker discovery in cancer drug response prediction

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-02-08 · 1 citations

• Supplementary Video: HPV and Heterocateny from Intratumoral Heterogeneity and Clonal Evolution Induced by HPV Integration

  2025-12-11

• Supplementary Figures S1-S6 and Tables S1-S5 from Intratumoral Heterogeneity and Clonal Evolution Induced by HPV Integration

  2025-12-11

• SVAlignR: Recovering Structure of Long Molecules from Structural Variation Data

  2025-09-24

• Supplementary Table S7. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal Cancers

  2025-09-04

• Supplementary Fig. S7. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal CancersPreprint

  2025-09-04

• Supplementary Fig. S6. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal CancersPreprint

  2025-09-04

• Supplementary Table S17. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal Cancers

  2025-09-04

• Supplementary Fig. S16. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal CancersPreprint

  2025-09-04

• Supplementary Table S9. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal Cancers

  2025-09-04

• Supplementary Fig. S17. from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal CancersPreprint

  2025-09-04

• Supplementary Fig. S14 from Human Papillomavirus Integration Induces Oncogenic Host Gene Fusions in Oropharyngeal CancersPreprint

  2025-09-04