Kushal K. Dey

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• <i>SPP1</i> ^hi macrophages in fibrin niches promote hyperplastic tissue remodeling in rheumatoid arthritis synovium

  Science Translational Medicine · 2026-06-24

• Population-scale sequencing resolves determinants of persistent EBV DNA

  Nature · 2026-01-28 · 8 citations

• A stem cell knockout village reveals lineage rewiring and a non-canonical islet cell fate in monogenic diabetes

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-12-25 · 3 citations

• The IGVF catalog—from genetic variation to function

  Nucleic Acids Research · 2025-12-08 · 3 citations

• Distributional genetic effects reveal context-dependent molecular regulation in human brain aging and Alzheimer’s diseasePreprint

  Research Square · 2025-12-01

• PRISM: ancestry-aware integration of tissue-specific genomic annotations enhances the transferability of polygenic scoresPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-13 · 1 citations

• Mapping disease critical spatially variable gene programs by integrating spatial transcriptomics with human geneticsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-25

• Population-scale sequencing resolves correlates and determinants of latent Epstein-Barr Virus infectionPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-07-18 · 1 citations

• Linking regulatory variants to target genes by integrating single-cell multiome methods and genomic distance

  Nature Genetics · 2025-06-12 · 6 citations

• colocboost: Multi-Context Colocalization Analysis for QTL and GWAS Studies

  2025-05-02

• Integrative multi-omics QTL colocalization maps regulatory architecture in aging human brainPreprint

  medRxiv · 2025-04-20 · 8 citations

• Genetic and functional analysis of unproductive splicing using LeafCutter2Preprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-04-08 · 6 citations

• A consensus variant-to-function score to functionally prioritize variants for diseasePreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-11-09 · 9 citations

• Deciphering the impact of genomic variation on function

  Nature · 2024-09-04 · 84 citations

• CRISPR screening uncovers a long-range enhancer for ONECUT1 in pancreatic differentiation and links a diabetes risk variant

  Cell Reports · 2024-08-01 · 12 citations