Luı́s A. Nunes Amaral

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Reply to Neveu and Neveu: Inference in an information-restricted environment

  Proceedings of the National Academy of Sciences · 2025-12-03

• Reply to Singer: Strike paper mills at the root

  Proceedings of the National Academy of Sciences · 2025-10-27

• Author response: The evolution of interdisciplinarity and internationalization in scientific journals

  2025-10-21

• The evolution of interdisciplinarity and internationalization in scientific journalsPreprint

  eLife · 2025-10-21 · 1 citations

• A principled approach to the identification of biologically relevant transcription factor binding sitesPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-09-25

• The entities enabling scientific fraud at scale are large, resilient, and growing rapidly

  Proceedings of the National Academy of Sciences · 2025-08-04 · 93 citations

• Open-source computational pipeline flags instances of acute respiratory distress syndrome in mechanically ventilated adult patients

  Nature Communications · 2025-07-23 · 2 citations

• The evolution of interdisciplinarity and internationalization in scientific journalsPreprint

  eLife · 2025-07-21

• The evolution of interdisciplinarity and internationalization in scientific journalsPreprint

  eLife · 2025-07-21 · 2 citations

• Widespread misidentification of scanning electron microscope instruments in the peer-reviewed materials science and engineering literature

  PLoS ONE · 2025-07-17 · 1 citations

• The evolution of interdisciplinarity and internationalization in scientific journalsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-05-28

• Widespread misidentification of SEM instruments in the peer-reviewed materials science and engineering literaturePreprint

  2025-02-19

• Adversarial training and attribution methods enable evaluation of robustness and interpretability of deep learning models for image classification

  Physical review. E · 2024-11-21 · 1 citations

• Robust extraction of pneumonia-associated clinical states from electronic health records

  Proceedings of the National Academy of Sciences · 2024-10-30 · 4 citations

• Meta-Research: Assessing the Alignment of Biomedical Research and Clinical TranslationPreprint

  medRxiv · 2024-10-10

• Widespread misidentification of SEM instruments in the peer-reviewed materials science and engineering literaturePreprint

  2024-08-27

• Distinctive evolution of alveolar T cell responses is associated with clinical outcomes in unvaccinated patients with SARS-CoV-2 pneumonia

  Nature Immunology · 2024-08-13 · 16 citations

• Computational experiments with cellular-automata generated images reveal intrinsic limitations of convolutional neural networks on pattern recognition tasks

  APL Machine Learning · 2024-07-15 · 1 citations