Full Professor(heuristic)

Bioinformatics and Genomic Networks · Molecular Biology

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h-index48
i10-index90
Publications157
Citations10,261

Grants

6 total · 1 active

NIH #R21AI182816

Predicting Viral Spillover Risk using Machine Learning and Adversarial Mutation

Active
Amount
$400K–$500K
Period
2025-06-252027-05-31
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

NIH #U01HG012039

Linking Variants to Multi-scale Phenotypes via a Synthesis of Subnetwork Inference and Deep Learning

Amount
$600K–$700K
Period
2021-09-012026-05-31
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

NIH #T15LM007359

Computation and Informatics in Biology and Medicine

Amount
$1M–$2M
Period
2002-07-012022-06-30
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

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All Grants

6 total · 1 active

NIH #R21AI182816

Predicting Viral Spillover Risk using Machine Learning and Adversarial Mutation

Active
Amount
$400K–$500K
Period
2025-06-252027-05-31
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

NIH #U01HG012039

Linking Variants to Multi-scale Phenotypes via a Synthesis of Subnetwork Inference and Deep Learning

Amount
$600K–$700K
Period
2021-09-012026-05-31
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

NIH #T15LM007359

Computation and Informatics in Biology and Medicine

Amount
$1M–$2M
Period
2002-07-012022-06-30
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

NIH #U54AI117924

The Center for Predictive Computational Phenotyping-1 Overall

Amount
$2M–$3M
Period
2014-09-292018-08-31
PIs
1

Awarded at UNIVERSITY OF WISCONSIN-MADISON

NSF #1218880

RI: Small: Active Learning with Rich Query Types on Networks and Trees

Amount
$400K–$500K
Period
2012-09-012016-08-31
PIs
1

Awarded at University of Wisconsin-Madison

NSF #0093016

CAREER: Machine Learning with Rich Data Sources and Interrelated Tasks

Amount
$400K–$500K
Period
2001-05-012007-04-30
PIs
1

Awarded at University of Wisconsin-Madison

Recent Public Signals

  1. New paper: Abstract 2507: Causal machine learning personalizes endocrine therapy selection for ductal carcinoma <i>in situ</i> (Cancer Research)2026-04-03
  2. New preprint: Gene- and domain-aware calibration increases the clinical utility of variant effect predictors2026-02-18
  3. New NIH award: Predicting Viral Spillover Risk using Machine Learning and Adversarial Mutation2025-06-25

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-08-29

Data may not be current

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ORCID: 0000-0002-8917-7464

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