Maximilian Haeussler

University of California, Santa Cruz

Full Professor(heuristic)

Single-cell and spatial transcriptomics · Molecular Biology

h-index56

i10-index87

Publications161

Citations31,523

Grants

7 total · 7 active

NIH #5U24AI183870-02

An in integrated platform for multiomic analyses of pathogen and host data using scalable public infrastructure

Active

Amount: $3.3M
Period: 2024-07-18 → 2029-06-30
PIs: 5
Est. capacity / PI: ~6 students

Awarded at PENNSYLVANIA STATE UNIVERSITY, THE

NIH #1U24AI183870-01

An in integrated platform for multiomic analyses of pathogen and host data using scalable public infrastructure

Active

Amount: $3.3M
Period: 2024-07-18 → 2029-06-30
PIs: 5
Est. capacity / PI: ~6 students

Awarded at PENNSYLVANIA STATE UNIVERSITY, THE

NIH #5U24HG002371-26

The UCSC Genome Browser

Active

Amount: $3.3M
Period: 2001-07-12 → 2027-04-30
PIs: 1
Est. capacity / PI: ~1 students

Awarded at UNIVERSITY OF CALIFORNIA SANTA CRUZ

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

Lab Funding Health

Find elsewhere

Institution / lab homepage Search on ResearchGate

In-Field Influence

0.0009

PageRank within Molecular Biology co-authorship network

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Admission Signals

New paper: Intrinsic coordination of dynamic molecular signatures shape the human prefrontal cortex (bioRxiv (Cold Spring Harbor Laboratory))2026-05-14
New preprint: From data to publication in a browser with BRC-Analytics: Evolutionary dynamics of coding overlaps in measles virus2025-10-14
New NIH award: $3,258K — An in integrated platform for multiomic analyses of pathogen and host data using scalable public infrastructure2024-07-18
New NIH award: $3,275K — An in integrated platform for multiomic analyses of pathogen and host data using scalable public infrastructure2024-07-18
New NIH award: $866K — A visualization interface for BRAIN single cell data, integrating transcriptomics, epigenomics and spatial assays2023-04-01
New NIH award: $3,319K — The UCSC Genome Browser2001-07-12
New NIH award: $3,319K — The UCSC Genome Browser2001-07-12
New NIH award: $3,962K — The UCSC Genome Browser2001-07-12
New NIH award: $3,984K — The UCSC Genome Browser2001-07-12

Data Freshness

Publications as of 2026-07-01
Grants as of 2026-06-30

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ORCID: 0000-0001-8721-8253

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

Potential Collaborators

Recent Publications

Last 2 years · showing 20 of 24

Intrinsic coordination of dynamic molecular signatures shape the human prefrontal cortex
bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-14
ucscGenomeBrowser/kent: v497 branch
Zenodo (CERN European Organization for Nuclear Research) · 2026-04-30
Population differences of chromosome 22q11.2 duplication structure predispose differentially to microdeletion and inversion
Nature Communications · 2026-04-18
ucscGenomeBrowser/kent: v496 branch
Zenodo (CERN European Organization for Nuclear Research) · 2026-04-08
An integrative single-nucleus multiomic atlas of the human left ventricle identifies gene regulatory network dynamics across cardiac development, aging, and disease
Genome biology · 2026-04-06 · 1 citations
SNP calling, haplotype phasing and allele-specific analysis with long RNA-seq reads
Nature Methods · 2026-03-30 · 1 citations
Author Correction: Single-cell atlas of the transcriptome and chromatin accessibility in the human retina
Nature Genetics · 2026-02-18 · 1 citations
ucscGenomeBrowser/kent: v493 branch
Open MIND · 2026-02-04
Using the linear references from the pangenome to discover missing autism variants
Nature Communications · 2026-01-23 · 3 citations
ucscGenomeBrowser/kent: v492 Genome Browser Software
Zenodo (CERN European Organization for Nuclear Research) · 2026-01-15
Making genomic data FAIR through effective Data Portals
Scientific Data · 2025-11-28 · 4 citations
The UCSC Genome Browser database: 2026 update
Nucleic Acids Research · 2025-11-18 · 73 citations
KegAlign: optimizing pairwise alignments with diagonal partitioning
Genome biology · 2025-11-17 · 1 citations
1112 A pan-cancer single-cell multimodal atlas of antigen-specific T cells and scalable framework for mapping antigen specificity
Regular and Young Investigator Award Abstracts · 2025-11-01
From data to publication in a browser with BRC-Analytics: Evolutionary dynamics of coding overlaps in measles virusPreprint
bioRxiv (Cold Spring Harbor Laboratory) · 2025-10-14 · 2 citations
Single-cell analysis of dup15q syndrome reveals developmental and postnatal molecular changes in autism
Nature Communications · 2025-07-04 · 1 citations
Mapping MAVE data for use in human genomics applications
Genome biology · 2025-06-25 · 11 citations
Integrated analysis of molecular atlases unveils modules driving developmental cell subtype specification in the human cortex
Nature Neuroscience · 2025-04-21 · 21 citations
Reclassification of VUS in BRCA1 and BRCA2 using the new BRCA1/BRCA2 ENIGMA track set demonstrates the superiority of ClinGen ENIGMA Expert Panel specifications over the standard ACMG/AMP classification system
Genetics in Medicine Open · 2025-01-01 · 8 citations
A panoramic view of cell population dynamics in mammalian aging
Science · 2024-11-28 · 80 citations

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