Full Professor(heuristic)

Biomedical Text Mining and Ontologies · Molecular Biology

h-index76
i10-index235
Publications607
Citations24,639

Grants

50 total · 7 active

NIH #3U2CHL156291-05S2

DCC Supplement for Experimental Models Portal

Expiring Soon
Amount
$798K
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3U2CHL156291-05S3

Integrating Imaging-based Infrastructure into the INCLUDE Data Hub

Expiring Soon
Amount
$985K
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #5U2CHL156291-05

Data Management and Portal for the INCLUDE (DAPI) Project

Expiring Soon
Amount
$3.9M
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

All Grants

50 total · 7 active

NIH #3U2CHL156291-05S2

DCC Supplement for Experimental Models Portal

Expiring Soon
Amount
$798K
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3U2CHL156291-05S3

Integrating Imaging-based Infrastructure into the INCLUDE Data Hub

Expiring Soon
Amount
$985K
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #5U2CHL156291-05

Data Management and Portal for the INCLUDE (DAPI) Project

Expiring Soon
Amount
$3.9M
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3U2CHL156291-05S1

Ensuring Data Compliance and Security for the INCLUDE Data Coordinating Center in Response to Emerging NIH/NHLBI Platform Environment Requirements

Expiring Soon
Amount
$200K
Period
2020-09-262026-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #1U01HG014142-01

Southeastern Genomic Medicine eConsult Network (SeGMeNt)

Active
Amount
$3.0M
Period
2026-04-102028-03-31
PIs
2
Est. capacity / PI
~22 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #3OT2OD036113-02S4

Iron-CLAD: securely advancing AoU participant characterization with proven platforms and collaborations

Active
Amount
$7.5M
Period
2026-04-012027-03-31
PIs
5
Est. capacity / PI
~18 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #7OT2OD036113-02

Iron-CLAD: securely advancing AoU participant characterization with proven platforms and collaborations

Active
Amount
$19.4M
Period
2023-09-022027-03-31
PIs
4
Est. capacity / PI
~16 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #5U24HG011449-05

The Human Phenotype Ontology: Accelerating Computational Integration of Clinical Data for Genomics

Amount
$812K
Period
2021-09-202026-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at JACKSON LABORATORY

NIH #5U24HG011449-04

The Human Phenotype Ontology: Accelerating Computational Integration of Clinical Data for Genomics

Amount
$724K
Period
2021-09-202026-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at JACKSON LABORATORY

NIH #5U24HG011449-03

The Human Phenotype Ontology: Accelerating Computational Integration of Clinical Data for Genomics

Amount
$760K
Period
2021-09-202026-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at JACKSON LABORATORY

NIH #5U24HG011449-02

The Human Phenotype Ontology: Accelerating Computational Integration of Clinical Data for Genomics

Amount
$739K
Period
2021-09-202026-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at JACKSON LABORATORY

NIH #1U24HG011449-01A1

The Human Phenotype Ontology: Accelerating Computational Integration of Clinical Data for Genomics

Amount
$776K
Period
2021-09-202026-06-30
PIs
2
Est. capacity / PI
~0 students

Awarded at JACKSON LABORATORY

NIH #7RM1HG010860-05

A phenomics-first resource for interpretation of variants

Amount
$1.9M
Period
2024-06-012026-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #3OT2OD036113-02S2

Iron-CLAD: securely advancing AoU participant characterization with proven platforms and collaborations

Amount
$5.2M
Period
2025-06-022026-03-31
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #3OT2OD036113-02S3

Iron-CLAD: securely advancing AoU participant characterization with proven platforms and collaborations

Amount
$1.3M
Period
2024-04-152026-03-31
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #7R24OD011883-13

The Monarch Initiative: Linking Diseases to Model Organism Resources

Amount
$1.3M
Period
2024-09-012025-08-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #3U2CHD109731-07S1

Enhancing CBTN digital pathology processing pipeline through the use AWS cloud-based services to enable automation, parallel processing, and rapid use of AI/ML analytics

Amount
$282K
Period
2017-09-262025-08-31
PIs
9
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #5U2CHL156291-04

Data Management and Portal for the INCLUDE (DAPI) Project

Amount
$3.9M
Period
2020-09-262025-08-31
PIs
6
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3U2CHD109731-07S4

KF Supplement -- Sustainable and Optimized Cloud Resources on behalf of the Kids First Data Resources

Amount
$500K
Period
2017-09-262025-08-31
PIs
9
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #5R24OD011883-11

The Monarch Initiative: Linking diseases to model organism resources

Amount
$1.3M
Period
2012-09-012025-08-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #3U2CHL156291-03S2

Advancing Image Data Interoperability and Standards within an NIH Ecosystem (AIDISNE): A CHOP, FlyWheel, and Seven Bridges Integration Demonstration Project

Amount
$912K
Period
2020-09-262025-08-31
PIs
8
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3R24OD011883-11S1

The Monarch Initiative: Linking diseases to model organism resources

Amount
$233K
Period
2012-09-012025-08-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #5U2CHL156291-03

Data Management and Portal for the INCLUDE (DAPI) Project

Amount
$3.9M
Period
2020-09-262025-08-31
PIs
7
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #9U2CHD109731-06

Gabriella Miller Kids First Pediatric Data Resource Center: Advancing Collaborative Platform-Enabled Data-Driven Discovery at the Intersection of Childhood Development and Cancer

Amount
$4.0M
Period
2017-09-262025-08-31
PIs
9
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #5U2CHL156291-02

Data Management and Portal for the INCLUDE (DAPI) Project

Amount
$3.9M
Period
2020-09-262025-08-31
PIs
7
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3U2CHL156291-02S1

User-ready tools and scalable workflows for INCLUDE datasets in the cloud: advancing brain imaging data management and analytics

Amount
$274K
Period
2020-09-262025-08-31
PIs
7
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #2R24OD011883-10A1

The Monarch Initiative: Linking diseases to model organism resources

Amount
$1.3M
Period
2012-09-012025-08-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #1U2CHL156291-01

Data Management and Portal for the INCLUDE (DAPI) Project

Amount
$4.0M
Period
2020-09-262025-08-31
PIs
7
Est. capacity / PI
~0 students

Awarded at CHILDREN'S HOSP OF PHILADELPHIA

NIH #3OT2OD036113-02S1

Iron-CLAD: securely advancing AoU participant characterization with proven platforms and collaborations

Amount
$450K
Period
2023-09-022025-06-01
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIV OF NORTH CAROLINA CHAPEL HILL

NIH #3RM1HG010860-03S1

Improvements to the LinkML framework to support the Phenomics First open science resource

Amount
$266K
Period
2021-07-092025-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #5RM1HG010860-03

A phenomics-first resource for interpretation of variants

Amount
$2.0M
Period
2021-07-092025-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #7RM1HG010860-02

A phenomics-first resource for interpretation of variants

Amount
$2.2M
Period
2021-07-092025-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #5R24OD011883-12

The Monarch Initiative: Linking diseases to model organism resources

Amount
$1.3M
Period
2012-09-012024-08-31
PIs
3
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #5RM1HG010860-04

A phenomics-first resource for interpretation of variants

Amount
$1.9M
Period
2021-07-092024-04-14
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #1OT2OD036113-01

Iron-CLAD: securely advancing AoU participant characterization with provenplatforms and collaborations

Amount
$10.6M
Period
2023-09-022024-04-14
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #7U13CA221044-05

Forums for Integrative Phenomics

Amount
$74K
Period
2017-09-182023-09-30
PIs
2
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #7U24TR002306-05

A National Center for Digital Health Informatics Innovation

Amount
$5.3M
Period
2021-08-152023-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #3U24TR002306-05S1

A National Center for Digital Health Informatics Innovation

Amount
$97K
Period
2021-09-252023-06-30
PIs
4
Est. capacity / PI
~0 students

Awarded at UNIVERSITY OF COLORADO DENVER

NIH #5U24TR002306-03

A National Center for Digital Health Informatics Innovation

Amount
$4.9M
Period
2017-09-202022-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at OREGON HEALTH & SCIENCE UNIVERSITY

NIH #3OT2TR003449-01S1

A Common Dialect for Infrastructure and Services in Translator

Amount
$570K
Period
2020-01-232021-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at OREGON STATE UNIVERSITY

NIH #3U24TR002306-04S3

CD2H - National COVID Cohort Collaborative (N3C)

Amount
$2.1M
Period
2021-03-152021-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at OREGON HEALTH & SCIENCE UNIVERSITY

NIH #5U24TR002306-04

A National Center for Digital Health Informatics Innovation

Amount
$4.9M
Period
2017-09-202021-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at OREGON HEALTH & SCIENCE UNIVERSITY

NIH #3U24TR002306-04S2

CD2H - The National COVID Cohort Collaborative (N3C) IDeA CTR Collaboration

Amount
$300K
Period
2017-09-202021-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at OREGON HEALTH & SCIENCE UNIVERSITY

NIH #1OT2TR003449-01

A Common Dialect for Infrastructure and Services in Translator

Amount
$958K
Period
2020-01-232021-06-30
PIs
3
Est. capacity / PI
~0 students

Awarded at OREGON STATE UNIVERSITY

NIH #3U24TR002306-04S1

CD2H - National COVID Cohort Collaborative (N3C)

Amount
$1.2M
Period
2017-09-202021-06-30
PIs
5
Est. capacity / PI
~0 students

Awarded at OREGON HEALTH & SCIENCE UNIVERSITY

NIH #1RM1HG010860-01

A phenomics-first resource for interpretation of variants

Amount
$2.0M
Period
2020-08-012021-05-31
PIs
2
Est. capacity / PI
~0 students

Awarded at OREGON STATE UNIVERSITY

NIH #5R24OD011883-09

The Monarch Initiative: Linking Diseases to Model Organism Resources

Amount
$1.3M
Period
2012-06-012021-05-31
PIs
3
Est. capacity / PI
~0 students

Awarded at OREGON STATE UNIVERSITY

NIH #5U13CA221044-04

Forums for Integrative Phenomics

Amount
$0K
Period
2017-09-182021-04-30
PIs
2
Est. capacity / PI
~0 students

Awarded at OREGON STATE UNIVERSITY

NIH #5U13CA221044-03

Forums for Integrative Phenomics

Amount
$74K
Period
2017-09-182020-09-17
PIs
2
Est. capacity / PI
~0 students

Awarded at OREGON STATE UNIVERSITY

NIH #3OT3TR002019-01S4

Biomedical Data Translator Technical Feasibility Assessment and Architecture Design

Amount
$1.6M
Period
2016-09-232020-03-31
PIs
3
Est. capacity / PI
~0 students

Awarded at JOHNS HOPKINS UNIVERSITY

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

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