Nathan C. Sheffield

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Automated biomedical hypothesis generation with time-aware hypergraph contrastive learning

  Knowledge and Information Systems · 2026-05-17

• HyHG: A Temporal Hypergraph Contrastive Learning Framework for Biomedical Hypothesis Generation

  2025-11-12 · 2 citations

• Atacformer: A transformer-based foundation model for analysis and interpretation of ATAC-seq dataPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-04 · 2 citations

• Fast, memory-efficient genomic interval tokenizers for modern machine learningPreprint

  ArXiv.org · 2025-11-03

• ConceptDrift: leveraging spatial, temporal and semantic evolution of biomedical concepts for hypothesis generation

  Bioinformatics · 2025-10-28

• Taming the reference genome jungle: the refget sequence collection standardPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-10-06 · 1 citations

• Card Dealing MathPreprint

  ArXiv.org · 2025-09-14

• Standards in the Preparation of Biomedical Research Metadata: A Bridge2AI PerspectivePreprint

  ArXiv.org · 2025-09-12

• AI-readiness Criteria for Biomedical DataPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-10-25 · 23 citations

• BEDMS: A metadata standardizer for genomic region attributesPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-09-23 · 1 citations

• Abstract P215: The reninness score: integrative analysis of multi-omic data to define renin cell identity.

  Hypertension · 2024-09-01

• Methods for constructing and evaluating consensus genomic interval sets

  Nucleic Acids Research · 2024-07-30 · 4 citations

• Inhibition of Renin Expression Is Regulated by an Epigenetic Switch From an Active to a Poised State

  Hypertension · 2024-07-11 · 7 citations