Pavel P. Kuksa

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• A TAD-informed aging-brain xQTL atlas of multi-modal and cell-type-resolved regulatory variation

  medRxiv · 2026-06-01

• Integrated genomic analysis and CRISPRi implicates EGFR in Alzheimer’s disease risk

  npj Dementia · 2025-12-16

• NIA Genetics of Alzheimer's Disease Data Storage Site (NIAGADS): 2025 Update

  Alzheimer s & Dementia · 2025-12-01

• BTS: a scalable Bayesian Tissue Score for prioritizing GWAS variants and their functional contexts across >1,000s of omics datasets

  Bioinformatics · 2025-09-26

• Multi-ancestry genome-wide meta-analysis of 56,241 individuals identifies known and novel cross-population and ancestry-specific associations as novel risk loci for Alzheimer’s disease

  Genome biology · 2025-07-17 · 15 citations

• Integrated genomic analysis and CRISPRi implicates <i>EGFR</i> in Alzheimer’s disease riskPreprint

  medRxiv · 2025-06-26 · 1 citations

• Unraveling temporal dynamics of the post-mortem transcriptome in amyotrophic lateral sclerosisPreprint

  medRxiv · 2025-06-13

• NIAGADS: A data repository for Alzheimer's disease and related dementia genomics

  Alzheimer s & Dementia · 2025-06-01 · 5 citations

• Alzheimer's Disease Sequencing Project release 4 whole genome sequencing dataset

  Alzheimer s & Dementia · 2025-05-01 · 24 citations

• Alzheimer’s Disease Sequencing Project Release 4 Whole Genome Sequencing DatasetPreprint

  medRxiv · 2024-12-06 · 6 citations

• NIA Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS)

  Alzheimer s & Dementia · 2024-12-01 · 1 citations

• Multi‐omic cell type‐level inference of mechanisms underlying non‐coding genetic variants for Alzheimer’s disease

  Alzheimer s & Dementia · 2024-12-01

• Variant‐gene pair in <i>silico</i> analyses and functional validation of LOAD GWAS loci in human brain‐relevant cell types identify <i>EGFR</i> as a target gene for potential drug repurposing

  Alzheimer s & Dementia · 2024-12-01

• 943 variants identified synthesizing chromatin conformation capture and quantitative trait loci with results from the Alzheimer’s Disease Variant Portal study

  Alzheimer s & Dementia · 2024-12-01

• NIA Genetics of Alzheimer’s Disease Data Storage Site (NIAGADS) AI‐Enhanced Search

  Alzheimer s & Dementia · 2024-12-01

• CHARMER: detecting and harmonizing high-confidence chromatin interactions across tissues and Hi-C protocolsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-11-26

• Author Correction: Genetic, transcriptomic, histological, and biochemical analysis of progressive supranuclear palsy implicates glial activation and novel risk genes

  Nature Communications · 2024-11-13

• BTS: scalable Bayesian Tissue Score for prioritizing GWAS variants and their functional contexts across omics dataPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-11-03

• NIAGADS: A Comprehensive National Data Repository for Alzheimer’s Disease and Related Dementia Genetics and Genomics ResearchPreprint

  medRxiv · 2024-10-08 · 7 citations

• Genetic, transcriptomic, histological, and biochemical analysis of progressive supranuclear palsy implicates glial activation and novel risk genes

  Nature Communications · 2024-09-09 · 40 citations