Ronan C. O’Malley

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Source data for positional grammar of transcription factor binding partitions developmental and stress-response regulation in plants

  Zenodo (CERN European Organization for Nuclear Research) · 2026-05-28

• Positional grammar of transcription factor binding partitions developmental and stress-response regulation in plants

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-02-06

• Multi‐season analysis reveals hundreds of drought‐responsive genes in sorghum

  The Plant Journal · 2026-02-01 · 2 citations

• A multi-omic characterization of the physiological responses to salt stress in Scenedesmus obliquus UTEX393

  Communications Biology · 2025-11-21 · 6 citations

• Unveiling a pervasive DNA adenine methylation regulatory network in the early-diverging fungus Rhizopus microsporus

  Nature Communications · 2025-11-21 · 3 citations

• TOR inhibition drives accumulation of amino acids through transcriptional activation in algaePreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-10-01

• Single-cell-level response to drought in <i>Sorghum bicolor</i> reveals novel targets for improving water use efficiencyPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-08-28 · 1 citations

• A novel regulator of the fungal phosphate starvation response revealed by transcriptional profiling and DNA affinity purification sequencing

  mBio · 2025-08-25

• Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate embryo and root development

  Plant Communications · 2025-07-29 · 3 citations

• Recruitment, rewiring and deep conservation in flowering plant gene regulation

  Nature Plants · 2025-07-15 · 25 citations

• Multi-season analysis reveals hundreds of drought-responsive genes in sorghumPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-07-02 · 1 citations

• Shoring up the base: The development and regulation of cortical sclerenchyma in grass nodal roots

  PLANT PHYSIOLOGY · 2025-05-29 · 2 citations

• Consecutive low-frequency shifts in A/T content denote nucleosome positions across microeukaryotes

  iScience · 2025-04-18 · 3 citations

• A novel regulator of the fungal phosphate starvation response revealed by transcriptional profiling and DNA affinity purification sequencingPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-04-09

• Early Dementia Detection Using Multiple Spontaneous Speech Prompts: The PROCESS Challenge

  2025-03-12 · 14 citations

• Genome-wide exploration of the transcriptional regulatory landscape in the early-diverging fungus <i>R. microsporus</i> reveals pervasive DNA methyl adenine regulatory networkPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-01-27

• Recruitment, rewiring, and deep conservation in flowering plant gene regulationPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-10-12 · 10 citations