Shuangge Ma

Yale University

Full Professor(heuristic)

Gene expression and cancer classification · Molecular Biology

h-index52
i10-index222
Publications511
Citations14,484

Grants

50 total · 8 active

NIH #1R03CA276790-01A1

Cancer Emulation Analysis with Deep Neural Network

Expiring Soon
Amount
$168K
Period
2023-09-19 → 2026-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #1R21DA061372-01

HIV Complex Causal Modeling: Gut Microbiome, Drug Use, and Immune Responses

Expiring Soon
Amount
$196K
Period
2024-08-01 → 2026-07-31
PIs
2
Est. capacity / PI
~0 students

NIH #2P50CA196530-11

Core B: Biostatistics and Bioinformatics Core

Active
Amount
$259K
Period
2025-09-08 → 2030-07-31
PIs
1
Est. capacity / PI
~3 students

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

All Grants

50 total · 8 active

NIH #1R03CA276790-01A1

Cancer Emulation Analysis with Deep Neural Network

Expiring Soon
Amount
$168K
Period
2023-09-19 → 2026-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #1R21DA061372-01

HIV Complex Causal Modeling: Gut Microbiome, Drug Use, and Immune Responses

Expiring Soon
Amount
$196K
Period
2024-08-01 → 2026-07-31
PIs
2
Est. capacity / PI
~0 students

NIH #2P50CA196530-11

Core B: Biostatistics and Bioinformatics Core

Active
Amount
$259K
Period
2025-09-08 → 2030-07-31
PIs
1
Est. capacity / PI
~3 students

NIH #2P30CA016359-44

Biostatistics Shared Resource

Active
Amount
$313K
Period
1997-07-01 → 2029-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA121974-18

Core C: Biostatistics and Bioinformatics Core

Active
Amount
$234K
Period
2006-06-01 → 2028-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA121974-17

Core C: Biostatistics and Bioinformatics Core

Active
Amount
$223K
Period
2006-06-01 → 2028-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #2P50CA121974-16

Core C: Biostatistics and Bioinformatics Core

Active
Amount
$206K
Period
2006-06-01 → 2028-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R21DA061372-02

HIV Complex Causal Modeling: Gut Microbiome, Drug Use, and Immune Responses

Active
Amount
$164K
Period
2024-08-01 → 2027-07-31
PIs
2
Est. capacity / PI
~0 students

NIH #5R01CA204120-08

Novel Methods for Identifying Genetic Interactions for Cancer Prognosis

Amount
$378K
Period
2016-07-01 → 2026-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA196530-10

Core B: Biostatistics and Bioinformatics Core

Amount
$233K
Period
2015-08-26 → 2025-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA196530-09

Core B: Biostatistics and Bioinformatics Core

Amount
$238K
Period
2015-08-26 → 2025-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R21HL161691-02

Deep Learning-based Emulation Analysis: Methodological Developments and Case Studies

Amount
$126K
Period
2022-08-15 → 2025-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA196530-08

Core B: Biostatistics and Bioinformatics Core

Amount
$226K
Period
2015-08-26 → 2025-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA196530-07

Core B: Biostatistics and Bioinformatics Core

Amount
$223K
Period
2015-08-26 → 2025-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R01CA204120-07

Novel Methods for Identifying Genetic Interactions for Cancer Prognosis

Amount
$390K
Period
2016-07-01 → 2025-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #5R01CA204120-06

Novel Methods for Identifying Genetic Interactions for Cancer Prognosis

Amount
$390K
Period
2016-07-01 → 2025-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #2R01CA204120-05A1

Novel Methods for Identifying Genetic Interactions for Cancer Prognosis

Amount
$398K
Period
2016-07-01 → 2025-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #1R21HL161691-01A1

Deep Learning-based Emulation Analysis: Methodological Developments and Case Studies

Amount
$126K
Period
2022-08-15 → 2024-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P30CA016359-43

Biostatistics Shared Resource

Amount
$382K
Period
1997-07-01 → 2024-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #3R01AI157488-03S1

Viral and immune-mediated CNS pathology during SARS-CoV-2 infection

Amount
$1.2M
Period
2020-07-24 → 2024-06-30
PIs
7
Est. capacity / PI
~0 students

NIH #5P50CA121974-15

Core 3: Biostatistics and Bioinformatics Core

Amount
$294K
Period
2006-06-01 → 2023-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA121974-14

Core 3: Biostatistics and Bioinformatics Core

Amount
$316K
Period
2006-06-01 → 2023-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P50CA121974-13

Core 3: Biostatistics and Bioinformatics Core

Amount
$320K
Period
2006-06-01 → 2023-08-31
PIs
1
Est. capacity / PI
~0 students

NIH #5P30CA016359-42

Biostatistics Shared Resource

Amount
$382K
Period
1997-07-01 → 2023-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R03CA241699-02

Integrated Cancer Modeling: A New Dimension

Amount
$84K
Period
2019-07-01 → 2022-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #5R01CA204120-04

Novel methods for identifying genetic interactions in cancer prognosis

Amount
$372K
Period
2016-07-01 → 2021-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #1R03CA241699-01

Integrated Cancer Modeling: A New Dimension

Amount
$84K
Period
2019-07-01 → 2021-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #5R03CA216017-02

Assisted Network-based Analysis of Cancer Gene Expression Studies

Amount
$84K
Period
2017-08-01 → 2020-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R01CA204120-03

Novel methods for identifying genetic interactions in cancer prognosis

Amount
$383K
Period
2016-07-01 → 2020-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #5R01CA204120-02

Novel methods for identifying genetic interactions in cancer prognosis

Amount
$383K
Period
2016-07-01 → 2020-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #1R01CA204120-01

Novel methods for identifying genetic interactions in cancer prognosis

Amount
$383K
Period
2016-07-01 → 2020-06-30
PIs
1
Est. capacity / PI
~0 students

NIH #1R03CA216017-01

Assisted Network-based Analysis of Cancer Gene Expression Studies

Amount
$84K
Period
2017-08-01 → 2019-07-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R21CA191383-03

Penalization methods for identifying gene envrionment interactions and applications to melanoma and other cancer types

Amount
$145K
Period
2014-12-24 → 2018-12-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R21CA191383-02

Penalization methods for identifying gene envrionment interactions and applications to melanoma and other cancer types

Amount
$145K
Period
2014-12-24 → 2017-12-31
PIs
1
Est. capacity / PI
~0 students

NIH #1R21CA191383-01

Penalization methods for identifying gene envrionment interactions and applications to melanoma and other cancer types

Amount
$145K
Period
2014-12-24 → 2017-12-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R03CA182984-02

Development of Integrated Analysis Methods and Applications to TCGA data

Amount
$83K
Period
2014-01-01 → 2016-12-31
PIs
1
Est. capacity / PI
~0 students

NIH #1R03CA182984-01

Development of Integrated Analysis Methods and Applications to TCGA data

Amount
$83K
Period
2014-01-01 → 2015-12-31
PIs
1
Est. capacity / PI
~0 students

NIH #5R21CA165923-03

Robust rank-based methods and detection of GXE in cancer etiology and survival

Amount
$141K
Period
2012-03-13 → 2015-05-31
PIs
2
Est. capacity / PI
~0 students

NIH #5R21CA165923-02

Robust rank-based methods and detection of GXE in cancer etiology and survival

Amount
$136K
Period
2012-03-13 → 2015-02-28
PIs
2
Est. capacity / PI
~0 students

NIH #5P30CA016359-41

Biostatistics Shared Resource

Amount
$382K
Period
— → —
PIs
1
Est. capacity / PI
~6 students

NIH #2P50CA196530-06

Core B: Biostatistics and Bioinformatics Core

Amount
$243K
Period
— → —
PIs
1
Est. capacity / PI
~4 students

NIH #5P30CA016359-40

Biostatistics Shared Resource

Amount
$382K
Period
— → —
PIs
1
Est. capacity / PI
~6 students

NIH #5P50CA121974-12

Core 3: Biostatistics and Bioinformatics Core

Amount
$316K
Period
— → —
PIs
1
Est. capacity / PI
~5 students

NIH #3P30CA016359-40S1

Biostatistics Shared Resource

Amount
$12K
Period
— → —
PIs
1
Est. capacity / PI
~0 students

NIH #3P30CA016359-39S1

Biostatistics Shared Resource

Amount
$12K
Period
— → —
PIs
1
Est. capacity / PI
~0 students

NIH #3P30CA016359-39S2

Biostatistics Shared Resource

Amount
$3K
Period
— → —
PIs
1
Est. capacity / PI
~0 students

NIH #2P30CA016359-39

Biostatistics Shared Resource

Amount
$382K
Period
— → —
PIs
1
Est. capacity / PI
~6 students

NIH #3P30CA016359-39S4

Biostatistics Shared Resource

Amount
$12K
Period
— → —
PIs
1
Est. capacity / PI
~0 students

NIH #3P30CA016359-39S3

Biostatistics Shared Resource

Amount
$3K
Period
— → —
PIs
1
Est. capacity / PI
~0 students

NIH #2P50CA121974-11A1

Core 3: Biostatistics and Bioinformatics Core

Amount
$335K
Period
— → —
PIs
1
Est. capacity / PI
~5 students

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

Potential Collaborators

Recent Publications

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