Smita Krishnaswamy

Yale University

Full Professor(heuristic)

Single-cell and spatial transcriptomics · Molecular Biology

h-index39

i10-index87

Publications296

Citations11,428

Grants

16 total · 6 active

NIH #2R01NS139561-06A1

Uncovering the dynamics and regulatory logic of cell fate specification in cerebral organoid data

Active

Amount: $635K
Period: 2025-05-09 → 2030-04-30
PIs: 2
Est. capacity / PI: ~4 students

NIH #5R01NS100547-09

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Active

Amount: $1.3M
Period: 2017-09-25 → 2027-12-31
PIs: 4
Est. capacity / PI: ~0 students

NIH #5R01NS100547-08

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Active

Amount: $1.2M
Period: 2017-09-25 → 2027-12-31
PIs: 4
Est. capacity / PI: ~0 students

Student capacity is a rough estimate from remaining award size, split equally among PIs. Actual funding decisions vary.

Lab Funding Health

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In-Field Influence

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Admission Signals

New NIH award: $183K — Rewire-CAN-Therapeutic Rewiring of Colorectal Cancer2026-05-01
New preprint: CellForge: Agentic Design of Virtual Cell Models2025-08-04
New NIH award: $635K — Uncovering the dynamics and regulatory logic of cell fate specification in cerebral organoid data2025-05-09
New NIH award: $1,327K — Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)2017-09-25
New NIH award: $1,194K — Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)2017-09-25
New NIH award: $1,287K — Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)2017-09-25
New NIH award: $1,354K — Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)2017-09-25

Data Freshness

Publications as of 2026-07-01
Grants as of 2026-06-30

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ORCID: 0000-0001-5823-1985

Career Trajectory

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Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

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Recent Publications

Last 2 years · showing 1 of 1

CellForge: Agentic Design of Virtual Cell ModelsPreprint
ArXiv.org · 2025-08-04 · 2 citations

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Smita Krishnaswamy

Grants

Uncovering the dynamics and regulatory logic of cell fate specification in cerebral organoid data

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

All Grants

Uncovering the dynamics and regulatory logic of cell fate specification in cerebral organoid data

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Discovery and analysis of the C. elegans neuronal gene expression network (CeNGEN)

Rewire-CAN-Therapeutic Rewiring of Colorectal Cancer

Deciphering Genetic and Epigenetic Regulatory Logic of Germ Layer Differentiation with Manifold Learning

Deciphering the regulatory code that specifies different cell fates in development using single cell genomics

Deciphering the regulatory code that specifies different cell fates in development using single cell genomics

Deciphering the regulatory code that specifies different cell fates in development using single cell genomics

Deciphering the regulatory code that specifies different cell fates in development using single cell genomics

Deciphering the regulatory code that specifies different cell fates in development using single cell genomics

Deciphering Genetic and Epigenetic Regulatory Logic of Germ Layer Differentiation with Manifold Learning

Deciphering Genetic and Epigenetic Regulatory Logic of Germ Layer Differentiation with Manifold Learning

Deciphering Genetic and Epigenetic Regulatory Logic of Germ Layer Differentiation with Manifold Learning

Deciphering Genetic and Epigenetic Regulatory Logic of Germ Layer Differentiation with Manifold Learning

Career Trajectory

Research Cluster Map

Potential Collaborators

Recent Publications