Sofie R. Salama

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• SpikeCanvas: An IoT-based control plane for event-triggered workflow orchestration of high-density neurophysiology data

  Array · 2026-06-19

• Servo-Actuated 3D-Printed Disposable Microvalves for Automated, Scalable Organoid Culture in Standard Incubators

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-06-17

• Microfluidic Control of Dorsal-Ventral Patterning Within a Single Forebrain Organoid

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-04-08

• The diploid reference genome of a human embryonic stem cell line

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-30 · 1 citations

• Genetic diversity and regulatory features of human-specific NOTCH2NL duplications

  Cell Genomics · 2026-03-30

• Automated Optofluidic Analysis of Single Extracellular Vesicles for Organoid Culture Monitoring

  IEEE Journal of Selected Topics in Quantum Electronics · 2026-03-10

• Establishing mouse forebrain organoids as models of intrinsic cortical network assembly

  Stem Cell Reports · 2026-03-05 · 2 citations

• Goal-directed learning in cortical organoids

  Cell Reports · 2026-02-01 · 7 citations

• A Modular In-Incubator Microscope for Longitudinal Live Cell Microscopy

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-01-23 · 1 citations

• Single molecule nanopore counting assay targeting small extracellular vesicle cargo for non-invasive monitoring of cerebral organoid development and health

  Scientific Reports · 2025-12-12 · 2 citations

• Weighted Graph for Longitudinal Tracking of Neurons in Cortical Organoids on a High-Density Microelectrode Array

  2025-07-14

• Microfluidic Topography Biases Neural Organoid Morphogenesis

  2025-07-14

• A feedback-driven brain organoid platform enables automated maintenance and high-resolution neural activity monitoring

  Internet of Things · 2025-07-07 · 14 citations

• Consistently processed RNA sequencing data from 50 sources enriched for pediatric data

  Scientific Data · 2025-07-02 · 2 citations

• Comparative analysis of RNA expression identifies effective targeted drug in myoepithelial carcinoma

  npj Precision Oncology · 2025-05-16 · 1 citations

• Self-Organizing Neural Networks in Organoids Reveal Principles of Forebrain Circuit AssemblyPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-05-02 · 7 citations

• Comparative analysis of RNA expression identifies effective targeted drug in myoepithelial carcinomaPreprint

  Research Square · 2025-04-16

• Comparative analysis of RNA expression in a single institution cohort of pediatric cancer patients

  npj Precision Oncology · 2025-03-21 · 2 citations

• HIPPIE: A Multimodal Deep Learning Model for Electrophysiological Classification of NeuronsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-03-15 · 4 citations

• 1166 Optogenetic Modulation of Network Activity in Human Hippocampus

  Neurosurgery · 2025-03-14