Stefan Niemann

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Targeted next-generation sequencing implementation in Eswatini identifies rifampicin and bedaquiline resistance undetected by routine diagnostic testing

  Nature Communications · 2026-06-10

• Global lineages of non-tuberculous mycobacteria in residential water samples from Germany

  BMC Microbiology · 2025-12-07 · 1 citations

• C1q and mannose-binding lectin binding and complement activation across genetically diverse <i>Mycobacterium tuberculosis</i> complex strains

  The Journal of Immunology · 2025-11-20

• Active case finding for tuberculosis among Ukrainian soldiers by German armed forces

  European Respiratory Journal · 2025-11-06 · 1 citations

• HIV status is not associated with SARS-CoV-2 viral load and longer duration of infection among people with well-controlled HIV and high COVID-19 vaccine coverage

  International Journal of Infectious Diseases · 2025-10-18 · 1 citations

• Cross-border investigation of a tuberculosis outbreak in Vienna linked to a multi-country cluster among foreign-born individuals, Europe, 2021 to 2025

  Eurosurveillance · 2025-08-21 · 1 citations

• Collision of Three Global Pandemics: The Effect of Tuberculosis and HIV on the Epidemiological, Clinical, Virological, and Immunological Trajectory of COVID-19 in Botswana and Namibia – a Protocol for a Prospective Case-ascertained and Surveillance Study (Preprint)

  2025-08-20

• Conference report: The second Bacterial Genome Sequencing Pan-European Network conference

  Microbes and Infection · 2025-08-08

• Serratia sp. traits distinguish the lung microbiome of patients with tuberculosis and non-tuberculous mycobacterial lung diseases

  PLoS ONE · 2025-06-26 · 1 citations

• Sex differences in risk factors for unsuccessful tuberculosis treatment outcomes in Eastern Europe from 2020 to 2022: a multi-country retrospective cohort study

  The Lancet Regional Health - Europe · 2025-06-25 · 7 citations

• The mutant selection window of moxifloxacin and bedaquiline resistant Mycobacterium tuberculosis

  Journal of Infection · 2025-05-30 · 2 citations

• DRTB-HDT: a randomized controlled trial of two adjunctive host-directed therapies in rifampin-resistant tuberculosis

  BMC Infectious Diseases · 2025-05-28 · 3 citations

• HIV status is not associated with SARS-CoV-2 viral load and longer duration of infection among people with well-controlled HIV and high COVID-19 vaccine coveragePreprint

  medRxiv · 2025-05-12

• The <i>ahpC</i> c−54t compensatory mutation is not always a valid surrogate for isoniazid resistance in <i>Mycobacterium tuberculosis</i>

  Antimicrobial Agents and Chemotherapy · 2025-04-22 · 1 citations

• Drug susceptibility testing for TB using the Xpert MTB/XDR assay on stool specimens

  The International Journal of Tuberculosis and Lung Disease · 2025-03-29 · 2 citations

• Rapid Diagnostic Sequencing of Stool DNA Using Targeted Nanopore Sequencing in Patients With a Pulmonary Tuberculosis Diagnosis

  Open Forum Infectious Diseases · 2025-03-06 · 3 citations

• Flying blind: urgency for drug-resistant testing for new tuberculosis drugs

  The Lancet Microbe · 2025-03-06 · 2 citations

• Differential rates of Mycobacterium tuberculosis transmission associate with host-pathogen sympatry

  Pneumologie · 2025-03-01

• Genome-wide analyses of Mycobacterium tuberculosis complex isolates reveal insights into circulating lineages and drug resistance mutations in The GambiaPreprint

  Research Square · 2025-02-27

• Are we overlooking the obvious? Bacterial evolution is at the heart of antimicrobial resistance

  The Lancet Microbe · 2025-02-01 · 6 citations