Taobo Hu

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• gSV: a general structural variant detector using the third-generation sequencing data

  Briefings in Bioinformatics · 2026-05-01

• Spatially resolved T cell receptor diversity mapping uncovers variability of the cancer immune microenvironment

  EBioMedicine · 2026-04-24

• Targeted sequencing of mutations via RNA-templated gap filling of oligonucleotides for single-cell RNA-seq

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-04-11

• Cell-GPS (COSTE Windows Application): Cophenetic Spatial Topology Embedding for multiscale tissue architecture analysis in spatial omics

  Zenodo (CERN European Organization for Nuclear Research) · 2026-04-01

• Bayesian Integrative Detection of Structural Variations With False Discovery Rate Control

  Biometrical Journal · 2026-03-27 · 1 citations

• gSV: a general structural variant detector using the third-generation sequencing data

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-04

• Exon 7 splicing of <scp>ERα</scp> predicts poor prognosis and increases phenotypic heterogeneity in luminal a subtype breast cancer

  FEBS Open Bio · 2026-02-17

• Proteomics characterization of triple-negative apocrine carcinoma reveals molecular features of progression and chemotherapy response

  Scientific Reports · 2025-11-13

• Comparing Xenium 5K and Visium HD data from identical tissue slide at a pathological perspective

  Journal of Experimental & Clinical Cancer Research · 2025-07-26 · 11 citations

• Dual‐Channel Coupling Approach Enhancing Multi‐Stain Pathology Image Matching for Enhancing Cancer Diagnostics

  Microscopy Research and Technique · 2025-05-19

• Optimizing Xenium In Situ data utility by quality assessment and best-practice analysis workflows

  Nature Methods · 2025-03-13 · 93 citations

• An Integrative Model of Single Cell Transcriptomic States for Triple-Negative Breast CancerPreprint

  Research Square · 2025-02-19

• BVSim: A benchmarking variation simulator mimicking human variation spectrum

  GigaScience · 2025-01-01 · 1 citations

• Dog deworming by smart collar: a 24-month field evaluation from a One Health prospective, randomized, double masked trial

  Science in One Health · 2025-01-01 · 1 citations

• Direct inference of haplotypes from sequencing data

  Bioinformatics Advances · 2024-12-26

• Parallel Analyses by Mass Spectrometry (MS) and Reverse Phase Protein Array (RPPA) Reveal Complementary Proteomic Profiles in Triple‐Negative Breast Cancer (TNBC) Patient Tissues and Cell Cultures

  PROTEOMICS · 2024-11-16 · 3 citations

• MRRM: Advanced Biomarker Alignment in Multi-Staining Pathology Images via Multi-Scale Ring Rotation-Invariant Matching

  IEEE Journal of Biomedical and Health Informatics · 2024-11-13 · 2 citations

• <scp>CellSAM</scp>: Advancing Pathologic Image Cell Segmentation via Asymmetric Large‐Scale Vision Model Feature Distillation Aggregation Network

  Microscopy Research and Technique · 2024-10-23 · 10 citations

• cascAGS: Comparative Analysis of SNP Calling Methods for Human Genome Data in the Absence of Gold Standard

  Interdisciplinary Sciences Computational Life Sciences · 2024-10-23

• Accurately matching serial whole slide images for tumor heterogeneity analysis

  Biomedical Signal Processing and Control · 2024-09-30 · 2 citations