Timothy E. Reddy

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Enhancer hubs govern chromatin topology and Th17 cell identity

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-04-04

• Identifying Inheritance Patterns of Allelic Imbalance, using Integrative Modeling and Bayesian Inference

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-31

• Structured Pooling Improves Detection of Rare Regulatory Mutations in Population-Scale Reporter Assays

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-31

• Modeling gene regulatory perturbations via deep learning from high-throughput reporter assays

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-31

• An expanded registry of candidate cis-regulatory elements

  Nature · 2026-01-07 · 29 citations

• The IGVF catalog—from genetic variation to function

  Nucleic Acids Research · 2025-12-08 · 3 citations

• The architecture of allele-specific regulatory variant effects across five human genomesPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-25

• Cell modeling and rescue of a novel noncoding genetic cause of glycogen storage disease IX

  Genetics in Medicine Open · 2025-11-20

• SMARCA2 is an essential and potent cofactor for a specific subset of the glucocorticoid response in A549 cellsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-14 · 1 citations

• Comprehensive evaluation of diverse massively parallel reporter assays to functionally characterize human enhancers genome-wide

  Genome biology · 2025-11-03 · 4 citations

• Promoter Deletion Leading to Allele Specific Expression in a Genetically Unsolved Case of Primary Ciliary Dyskinesia

  UNC Libraries · 2025-10-05

• Gene regulatory activity associated with polycystic ovary syndrome revealed DENND1A-dependent testosterone production

  Nature Communications · 2025-08-18 · 6 citations

• The gene regulatory effects of selective glucocorticoid receptor ligandsPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-06-16 · 1 citations

• Cell Modeling and Rescue of a Novel Non-coding Genetic Cause of Glycogen Storage Disease IXPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-05-17

• Bayesian estimation of allele-specific expression in the presence of phasing uncertainty

  Bioinformatics · 2025-05-03 · 1 citations

• Comprehensive Evaluation of Diverse Massively Parallel Reporter Assays to Functionally Characterize Human Enhancers Genome-widePreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-03-27 · 2 citations

• An Expanded Registry of Candidate cis-Regulatory Elements for Studying Transcriptional RegulationPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-12-26 · 12 citations

• A consensus variant-to-function score to functionally prioritize variants for diseasePreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2024-11-09 · 9 citations

• Promoter Deletion Leading to Allele Specific Expression in a Genetically Unsolved Case of Primary Ciliary Dyskinesia

  American Journal of Medical Genetics Part A · 2024-10-04 · 1 citations

• Deciphering the impact of genomic variation on function

  Nature · 2024-09-04 · 84 citations