Full Professor(heuristic)

Bioinformatics and Genomic Networks · Molecular Biology

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h-index108
i10-index265
Publications646
Citations122,703

Grants

12 total · 3 active

NIH #U54CA274502

The Cancer Cell Map Initiative v2.0

Active
Amount
$2M–$3M
Period
2022-09-14 → 2027-08-31
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA, SAN FRANCISCO

NIH #U24HG012107

CYTOSCAPE: AN ECOSYSTEM FOR NETWORK GENOMICS

Active
Amount
$1M–$2M
Period
2022-09-01 → 2027-06-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #R01HG012351

Next generation massively multiplexed combinatorial genetic screens

Active
Amount
$600K–$700K
Period
2023-03-15 → 2027-01-31
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

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All Grants

12 total · 3 active

NIH #U54CA274502

The Cancer Cell Map Initiative v2.0

Active
Amount
$2M–$3M
Period
2022-09-14 → 2027-08-31
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA, SAN FRANCISCO

NIH #U24HG012107

CYTOSCAPE: AN ECOSYSTEM FOR NETWORK GENOMICS

Active
Amount
$1M–$2M
Period
2022-09-01 → 2027-06-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #R01HG012351

Next generation massively multiplexed combinatorial genetic screens

Active
Amount
$600K–$700K
Period
2023-03-15 → 2027-01-31
PIs
2

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #OT2OD032742

Bridge2AI: Cell Maps for AI (CM4AI) Data Generation Project

Amount
$5M–$6M
Period
2022-09-01 → 2026-08-31
PIs
10

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #P41GM103504

Administration and Management

Amount
$200K–$300K
Period
2010-09-13 → 2025-04-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #P50DA037844

Center for Genetic Studies of Drug Abuse in Outbred Rats

Amount
$300K–$400K
Period
2014-06-15 → 2024-04-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #R01ES014811

A Systems Approach to Mapping the DNA Damage Response

Amount
$500K–$600K
Period
2005-09-26 → 2023-08-31
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN DIEGO

NIH #U19AI135990

CORE 1: Data Management and Bioinformatics

Amount
$500K–$600K
Period
2018-08-17 → 2023-07-31
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN FRANCISCO

NIH #U01MH115747

The Psychiatric Cell Map Initiative: Connecting Genomics, Subcellular Networks, and Higher Order Phenotypes

Amount
$4M–$5M
Period
2018-09-05 → 2023-06-30
PIs
4

Awarded at UNIVERSITY OF CALIFORNIA, SAN FRANCISCO

NIH #U54CA209891

Bioinformatics

Amount
$100K–$200K
Period
2017-05-11 → 2022-04-30
PIs
1

Awarded at UNIVERSITY OF CALIFORNIA, SAN FRANCISCO

NSF #0803937

III-CXT-Medium: Biological Data Integration Using Large-Scale Molecular Interaction Networks

Amount
$800K–$900K
Period
2008-08-01 → 2012-07-31
PIs
2

Awarded at University of California-San Diego

NSF #0425926

QSB: Enabling Pathway Queries in Large Molecular Interaction Networks

Amount
$400K–$500K
Period
2004-08-15 → 2007-07-31
PIs
1

Awarded at University of California-San Diego

Recent Public Signals

  1. New paper: A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells (Nature Biotechnology)2026-07-01
  2. New preprint: HyperMap: An Efficient Framework for Transferring Perturbation Responses Across Diverse Biological Contexts2026-04-27
  3. New NIH award: Next generation massively multiplexed combinatorial genetic screens2023-03-15

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-09-03

Data may not be current

Find elsewhere

Institution / lab homepage Search on ResearchGate

ORCID: 0000-0002-1708-8454

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