William Stafford Noble

Career Trajectory

Research Cluster Map

Direct collaborators. Node size = influence, colour = community, dashed = past collaboration.

• Noble-Lab/casanovo: Casanovo v5.2.0

  Zenodo (CERN European Organization for Nuclear Research) · 2026-06-03

• Embryo-scale Visual Cell Sorting reveals a conserved transcriptomic signature of nucleolar size linked to proteostasis

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-26

• Prioritizing peptides for targeted mass spectrometry experiments using deep learning

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-26

• A quantitative proteomics dataset for assessment and prediction of low dose X-ray radiation exposure in mice

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-05-19 · 1 citations

• Cell-type specific allelic dampening of sex-linked genes in sex chromosome aneuploidy

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-04-21

• Carafe2 enables high quality <i>in silico</i> spectral library generation for timsTOF data-independent acquisition proteomics

  bioRxiv (Cold Spring Harbor Laboratory) · 2026-03-31 · 2 citations

• <b>A living proteomics benchmark for comprehensive </b><b>evaluation of deep learning-based </b><b><i>de novo</i></b><b> peptide </b><b>sequencing tools</b>

  Figshare · 2026-03-12

• <b>A living proteomics benchmark for comprehensive </b><b>evaluation of deep learning-based </b><b><i>de novo</i></b><b> peptide </b><b>sequencing tools</b>

  Figshare · 2026-03-12

• Additional file 1 of Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Figshare · 2026-03-10

• Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Genome biology · 2026-03-10 · 1 citations

• Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Figshare · 2026-03-10

• Additional file 2 of Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Figshare · 2026-03-10

• Additional file 2 of Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Figshare · 2026-03-10

• Additional file 1 of Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Figshare · 2026-03-10

• Benchmarking Hi-C scaffolders using reference genomes and de novo assemblies

  Figshare · 2026-03-10

• Improvements to Casanovo, a Deep Learning <i>De Novo</i> Peptide Sequencer

  Journal of Proteome Research · 2025-12-30 · 1 citations

• An integrated view of the structure and function of the human 4D nucleome

  Nature · 2025-12-17 · 28 citations

• MTOR AS AN IMMUNE MEDIATOR OF THE FLASH EFFECT

  International Journal of Particle Therapy · 2025-11-25

• Puget predicts gene expression across cell types using sequence and 3D chromatin organization dataPreprint

  bioRxiv (Cold Spring Harbor Laboratory) · 2025-11-20

• Proteomics Data Imputation With a Deep Model That Learns From Many Datasets

  Molecular & Cellular Proteomics · 2025-11-20 · 1 citations