Full Professor(heuristic)

Genomics and Chromatin Dynamics · Molecular Biology

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h-index123
i10-index344
Publications540
Citations71,303

Grants

20 total · 5 active

NIH #U01HG013198

Multi-Omics DACC: The Data Analysis and Coordination Center for the collaborative multi-omics for health and disease initiative

Active
Amount
$4M–$5M
Period
2023-09-122028-09-22
PIs
3

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U24MH136793

PsychENCODE Data Analysis and Coordination Center

Active
Amount
$800K–$900K
Period
2024-05-012028-02-29
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U24OD038421

Community Data Hub for Integrative Visualization

Active
Amount
$900K–$1000K
Period
2024-09-192027-08-31
PIs
2

Awarded at HARVARD MEDICAL SCHOOL

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All Grants

20 total · 5 active

NIH #U01HG013198

Multi-Omics DACC: The Data Analysis and Coordination Center for the collaborative multi-omics for health and disease initiative

Active
Amount
$4M–$5M
Period
2023-09-122028-09-22
PIs
3

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U24MH136793

PsychENCODE Data Analysis and Coordination Center

Active
Amount
$800K–$900K
Period
2024-05-012028-02-29
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U24OD038421

Community Data Hub for Integrative Visualization

Active
Amount
$900K–$1000K
Period
2024-09-192027-08-31
PIs
2

Awarded at HARVARD MEDICAL SCHOOL

NIH #U01CA294209

Integrative Analysis and Visualization Platform for Cancer Regulatory Genomics

Active
Amount
$400K–$500K
Period
2024-08-122027-07-31
PIs
1

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U24HG012343

A Comprehensive Genomic Community Resource of Transcriptional Regulation

Active
Amount
$900K–$1000K
Period
2022-06-012027-03-31
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U01HG012064

Predictive Modeling of the Functional and Phenotypic Impacts of Genetic Variants

Amount
$700K–$800K
Period
2021-08-202026-05-31
PIs
3

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U01AI173584

iSCREEN: An Integrative Data and Annotation Platform of Gene Regulation for Immune-mediated Disease Research

Amount
$500K–$600K
Period
2022-09-122025-06-30
PIs
1

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #R56AG078453

Single-cell analysis of DNA damage, somatic mutation, and gene expression in human Alzheimer’s disease brain

Amount
$800K–$900K
Period
2023-09-012025-05-31
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U01MH116492

1/2 Discovery and validation of neuronal enhancers associated with the development of psychiatric disorders

Amount
$1M–$2M
Period
2018-07-062023-03-31
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #R03OD030608

Constructing multi-omics regulatory networks for functional variant annotation

Amount
$300K–$400K
Period
2020-09-182022-08-31
PIs
1

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U24HG009446

EDAC: ENCODE Data Analysis Center

Amount
$2M–$3M
Period
2017-02-012021-01-31
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #R01HD049116

piRNA Biogenesis and Function in Germline Development

Amount
$500K–$600K
Period
2014-12-062019-11-30
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #R01GM103773

Development of a Computational Framework for TCR Engineering

Amount
$300K–$400K
Period
2013-04-012018-03-31
PIs
2

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NIH #U41HG007000

EDAC: ENCODE Data Analysis Center

Amount
$2M–$3M
Period
2012-09-212017-07-31
PIs
1

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

NSF #0850008

Computational Analysis of Nucleosome Positioning Signals in Eukaryotic Genomes

Amount
$900K–$1000K
Period
2009-05-152013-04-30
PIs
2

Awarded at University of Massachusetts Medical School

NSF #0133834

CAREER: An Integrated Approach to Predictive Protein-Protein Docking

Amount
$700K–$800K
Period
2002-02-012008-01-31
PIs
1

Awarded at Trustees of Boston University

NSF #0116574

Acquisition of Computing Infrastructure for Bioinformatics Research and Education

Amount
$400K–$500K
Period
2001-09-012005-08-31
PIs
5

Awarded at Trustees of Boston University

NSF #0078194

Identifying the building blocks of protein structures

Amount
$500K–$600K
Period
2000-09-012004-08-31
PIs
1

Awarded at Trustees of Boston University

NSF #9806002

POWRE: Protein Docking With Binding Free Energy Target Functions

Amount
<$100K
Period
1998-10-012000-09-30
PIs
1

Awarded at Trustees of Boston University

NIH #P01HD078253

Small Silencing RNA Function in Genome Maintenance and Gamete Development

Amount
$200K–$300K
Period
PIs
1

Awarded at UNIV OF MASSACHUSETTS MED SCH WORCESTER

Recent Public Signals

  1. New paper: Natural language-based representation and modeling of RBP binding (Zenodo (CERN European Organization for Nuclear Research))2026-06-17
  2. New preprint: A linguistics-based algorithm for RBP motif and context discovery2026-03-18
  3. New NIH award: Community Data Hub for Integrative Visualization2024-09-19

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Data Freshness

  • Publications as of 2026-07-09
  • Grants as of 2026-08-29

Data may not be current

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ORCID: 0000-0002-3032-7966

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